RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ZNF273Q14593 569 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 ZNF260Q3ZCT1 412 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 CDNFQ49AH0 187 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 TMEM200BQ69YZ2 307 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 CYB5R2Q6BCY4 276 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 CCDC190Q86UF4 302 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 FAM185AQ8N0U4 392 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 C8orf46Q8TAG6 207 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 TMEM186Q96B77 213 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 WDFY2Q96P53 400 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 SMR3AQ99954 134 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 NUDT16L1Q9BRJ7 211 aaKnown RBP12.26□□□□□ -0.45
CCNE1-202ENST00000357943 HDHD3Q9BSH5 251 aaPredicted RBP12.26□□□□□ -0.45
CCNE1-202ENST00000357943 HIF1ANQ9NWT6 349 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 CSPG4Q6UVK1 2322 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 MEIKINA0A087WXM9 373 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 TRAV39A0A0B4J263 110 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 A0A1W2PQ09 198 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 ODAMA1E959 279 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 MT-ND4P03905 459 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 TNFSF8P32971 234 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 ETV6P41212 452 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 TMEM69Q5SWH9 247 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 SLC35E4Q6ICL7 350 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 GAPTQ8N292 157 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 OR4K15Q8NH41 348 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 ABCA1O95477 2261 aa12.26□□□□□ -0.45
CCNE1-202ENST00000357943 KIR2DS1A0A191URI9 304 aa12.25□□□□□ -0.45
CCNE1-202ENST00000357943 TMEM30CPA0ZSE6 113 aa12.25□□□□□ -0.45
CCNE1-202ENST00000357943 FUOMA2VDF0 154 aa12.25□□□□□ -0.45
CCNE1-202ENST00000357943 TMEM235A6NFC5 223 aa12.25□□□□□ -0.45
CCNE1-202ENST00000357943 ENSAO43768 121 aaKnown RBP12.25□□□□□ -0.45
CCNE1-202ENST00000357943 PTHLHP12272 177 aa12.25□□□□□ -0.45
CCNE1-202ENST00000357943 CCL3L1P16619 93 aa12.25□□□□□ -0.45
CCNE1-202ENST00000357943 MEF2CQ06413 473 aaPredicted RBP12.25□□□□□ -0.45
CCNE1-202ENST00000357943 DCTN2Q13561 401 aaKnown RBP12.25□□□□□ -0.45
CCNE1-202ENST00000357943 Q6ZPA2 131 aa12.25□□□□□ -0.45
CCNE1-202ENST00000357943 OR13A1Q8NGR1 328 aa12.25□□□□□ -0.45
CCNE1-202ENST00000357943 MRPL30Q8TCC3 161 aaKnown RBP12.25□□□□□ -0.45
CCNE1-202ENST00000357943 CCDC107Q8WV48 283 aa12.25□□□□□ -0.45
CCNE1-202ENST00000357943 BORCS5Q969J3 196 aa12.25□□□□□ -0.45
CCNE1-202ENST00000357943 EXTL2Q9UBQ6 330 aa12.25□□□□□ -0.45
CCNE1-202ENST00000357943 INSIG2Q9Y5U4 225 aa12.25□□□□□ -0.45
CCNE1-202ENST00000357943 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.24□□□□□ -0.452e-6■■■■□ 20.7
CCNE1-202ENST00000357943 TRAV20A0A0B4J274 112 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 hADV38S2A0JD32 116 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 SERPINE3A8MV23 424 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 J3QRK9 145 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 CA11O75493 328 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 NAPSAO96009 420 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 LIPFP07098 398 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 TAS2R20P59543 309 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 ERVFRD-1P60508 538 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 ARF6P62330 175 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 ZNF45Q02386 682 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 DCAF12L2Q5VW00 463 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 CNIH2Q6PI25 160 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 BTNL3Q6UXE8 466 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 TRAPPC6BQ86SZ2 158 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 MRGPRDQ8TDS7 321 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 GCDHQ92947 438 aaPredicted RBP12.24□□□□□ -0.45
CCNE1-202ENST00000357943 CMSS1Q9BQ75 279 aaKnown RBP12.24□□□□□ -0.45
CCNE1-202ENST00000357943 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.24□□□□□ -0.45
CCNE1-202ENST00000357943 MRPS7Q9Y2R9 242 aaKnown RBP12.24□□□□□ -0.45
CCNE1-202ENST00000357943 LINC00312Q9Y6C7 94 aa12.24□□□□□ -0.45
CCNE1-202ENST00000357943 HLA-DQB1P01920 261 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 GSTP1P09211 210 aaKnown RBP12.23□□□□□ -0.45
CCNE1-202ENST00000357943 RCC1P18754 421 aaPredicted RBP12.23□□□□□ -0.45
CCNE1-202ENST00000357943 GLP1RP43220 463 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 DVL1P1P54792 670 aaPredicted RBP12.23□□□□□ -0.45
CCNE1-202ENST00000357943 ARL6IP1Q15041 203 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 HACD4Q5VWC8 232 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 FAHD2BQ6P2I3 314 aaPredicted RBP12.23□□□□□ -0.45
CCNE1-202ENST00000357943 GLCCI1Q86VQ1 547 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 NUDCD2Q8WVJ2 157 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 FAHD2AQ96GK7 314 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 DIRAS2Q96HU8 199 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 NCOR1P1Q9H4R4 102 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 AUNIPQ9H7T9 357 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 CHMP1AQ9HD42 196 aaPredicted RBP12.23□□□□□ -0.45
CCNE1-202ENST00000357943 C12orf4Q9NQ89 552 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 OR6C3Q9NZP0 311 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 ONECUT1Q9UBC0 465 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 ADAM30Q9UKF2 790 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 TRAPPC2LQ9UL33 140 aa12.23□□□□□ -0.45
CCNE1-202ENST00000357943 TRGV10A0A0A0MS01 117 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 A0A0G2JMP0 313 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 A0A0X1KG70 313 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 CD5LO43866 347 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 MELTFP08582 738 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 CD3GP09693 182 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 CD40LGP29965 261 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 TALDO1P37837 337 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 MNDAP41218 407 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 PPP5CP53041 499 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 PAX8Q06710 450 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 ARFRP1Q13795 201 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 SPANXN2Q5MJ10 180 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 C5orf24Q7Z6I8 188 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 C11orf42Q8N5U0 333 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms