RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 ZNF273Q14593 569 aa20.95■□□□□ 0.94
SSBP3-202ENST00000357475 TMEM249Q2WGJ8 235 aa20.95■□□□□ 0.94
SSBP3-202ENST00000357475 RNASE12Q5GAN4 147 aaKnown RBP20.95■□□□□ 0.94
SSBP3-202ENST00000357475 OR13A1Q8NGR1 328 aa20.95■□□□□ 0.94
SSBP3-202ENST00000357475 C1orf159Q96HA4 380 aa20.95■□□□□ 0.94
SSBP3-202ENST00000357475 RPUSD1Q9UJJ7 312 aaKnown RBP20.95■□□□□ 0.94
SSBP3-202ENST00000357475 LOC105371242A0A075B767 164 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 FABP12A6NFH5 140 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 SERPINE3A8MV23 424 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 HEXAP06865 529 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 MELTFP08582 738 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 ERP29P30040 261 aaKnown RBP20.94■□□□□ 0.94
SSBP3-202ENST00000357475 IL18Q14116 193 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 TMEM200BQ69YZ2 307 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 FAM185AQ8N0U4 392 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 MAFIPQ8WZ33 124 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 DACT3Q96B18 629 aaPredicted RBP20.94■□□□□ 0.94
SSBP3-202ENST00000357475 ZNF230Q9UIE0 474 aaPredicted RBP20.94■□□□□ 0.94
SSBP3-202ENST00000357475 FCER2P06734 321 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 IGHV4-31P0DP07 118 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 RCC1P18754 421 aaPredicted RBP20.94■□□□□ 0.94
SSBP3-202ENST00000357475 MNDAP41218 407 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 ZNF79Q15937 498 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 FAM131AQ6UXB0 335 aa20.94■□□□□ 0.94
SSBP3-202ENST00000357475 CHMP1AQ9HD42 196 aaPredicted RBP20.94■□□□□ 0.94
SSBP3-202ENST00000357475 FOXH1O75593 365 aa20.93■□□□□ 0.94
SSBP3-202ENST00000357475 CD3GP09693 182 aa20.93■□□□□ 0.94
SSBP3-202ENST00000357475 CCL3L1P16619 93 aa20.93■□□□□ 0.94
SSBP3-202ENST00000357475 GNG2P59768 71 aa20.93■□□□□ 0.94
SSBP3-202ENST00000357475 ERVFRD-1P60508 538 aa20.93■□□□□ 0.94
SSBP3-202ENST00000357475 LY6G5BQ8NDX9 201 aa20.93■□□□□ 0.94
SSBP3-202ENST00000357475 UBALD1Q8TB05 177 aa20.93■□□□□ 0.94
SSBP3-202ENST00000357475 MRGPRDQ8TDS7 321 aa20.93■□□□□ 0.94
SSBP3-202ENST00000357475 MSI2Q96DH6 328 aaKnown RBP20.93■□□□□ 0.94
SSBP3-202ENST00000357475 C12orf4Q9NQ89 552 aa20.93■□□□□ 0.94
SSBP3-202ENST00000357475 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.93■□□□□ 0.941e-8■■■■■ 26.8
SSBP3-202ENST00000357475 GPR37O15354 613 aa20.92■□□□□ 0.94
SSBP3-202ENST00000357475 FCGR3AP08637 254 aa20.92■□□□□ 0.94
SSBP3-202ENST00000357475 PNLIPRP3Q17RR3 467 aa20.92■□□□□ 0.94
SSBP3-202ENST00000357475 C8orf46Q8TAG6 207 aa20.92■□□□□ 0.94
SSBP3-202ENST00000357475 SETD6Q8TBK2 473 aa20.92■□□□□ 0.94
SSBP3-202ENST00000357475 WNK2Q9Y3S1 2297 aa20.92■□□□□ 0.94
SSBP3-202ENST00000357475 SVEP1Q4LDE5 3571 aa20.91■□□□□ 0.94
SSBP3-202ENST00000357475 ACANP16112 2415 aa20.91■□□□□ 0.94
SSBP3-202ENST00000357475 A0A1W2PQ09 198 aa20.91■□□□□ 0.94
SSBP3-202ENST00000357475 MSMBP08118 114 aa20.91■□□□□ 0.94
SSBP3-202ENST00000357475 GLP1RP43220 463 aa20.91■□□□□ 0.94
SSBP3-202ENST00000357475 ARL6IP1Q15041 203 aa20.91■□□□□ 0.94
SSBP3-202ENST00000357475 ZNF880Q6PDB4 577 aa20.91■□□□□ 0.94
SSBP3-202ENST00000357475 TRAPPC6BQ86SZ2 158 aa20.91■□□□□ 0.94
SSBP3-202ENST00000357475 MFSD4AQ8N468 514 aa20.91■□□□□ 0.94
SSBP3-202ENST00000357475 GVQW1Q8N7I0 195 aa20.91■□□□□ 0.94
SSBP3-202ENST00000357475 AKIP1Q9NQ31 210 aa20.91■□□□□ 0.94
SSBP3-202ENST00000357475 TRAPPC2LQ9UL33 140 aa20.91■□□□□ 0.94
SSBP3-202ENST00000357475 TRBV23-1A0A0A0MS06 115 aa20.9■□□□□ 0.94
SSBP3-202ENST00000357475 PPIAL4CA0A0B4J2A2 164 aa20.9■□□□□ 0.94
SSBP3-202ENST00000357475 CA11O75493 328 aa20.9■□□□□ 0.94
SSBP3-202ENST00000357475 ECDO95905 644 aaPredicted RBP20.9■□□□□ 0.94
SSBP3-202ENST00000357475 PPIAL4GP0DN37 164 aa20.9■□□□□ 0.94
SSBP3-202ENST00000357475 ETV6P41212 452 aa20.9■□□□□ 0.94
SSBP3-202ENST00000357475 DGCR2P98153 550 aa20.9■□□□□ 0.94
SSBP3-202ENST00000357475 MEF2CQ06413 473 aaPredicted RBP20.9■□□□□ 0.94
SSBP3-202ENST00000357475 CD276Q5ZPR3 534 aa20.9■□□□□ 0.94
SSBP3-202ENST00000357475 COX4I2Q96KJ9 171 aa20.9■□□□□ 0.94
SSBP3-202ENST00000357475 POLR3KQ9Y2Y1 108 aaPredicted RBP20.9■□□□□ 0.94
SSBP3-202ENST00000357475 IGKV1D-8A0A087WSZ0 117 aa20.89■□□□□ 0.94
SSBP3-202ENST00000357475 IGHV2-70DA0A0C4DH43 119 aa20.89■□□□□ 0.94
SSBP3-202ENST00000357475 B4DSR2 109 aa20.89■□□□□ 0.94
SSBP3-202ENST00000357475 PRSS3P35030 304 aa20.89■□□□□ 0.94
SSBP3-202ENST00000357475 SSTR5P35346 364 aa20.89■□□□□ 0.94
SSBP3-202ENST00000357475 DLX1P56177 255 aa20.89■□□□□ 0.94
SSBP3-202ENST00000357475 SPANXN2Q5MJ10 180 aa20.89■□□□□ 0.94
SSBP3-202ENST00000357475 PYHIN1Q6K0P9 492 aa20.89■□□□□ 0.94
SSBP3-202ENST00000357475 LINC01356Q8N9X3 169 aa20.89■□□□□ 0.94
SSBP3-202ENST00000357475 OR52I2Q8NH67 350 aa20.89■□□□□ 0.94
SSBP3-202ENST00000357475 Q9N2K0 584 aa20.89■□□□□ 0.94
SSBP3-202ENST00000357475 MBNL3Q9NUK0 354 aaKnown RBP20.89■□□□□ 0.94
SSBP3-202ENST00000357475 TRBV6-6A0A0A6YYG2 114 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 hADV38S2A0JD32 116 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 FUOMA2VDF0 154 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 DLX6P56179 175 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 MRPS15P82914 257 aaKnown RBP20.88■□□□□ 0.93
SSBP3-202ENST00000357475 C17orf58Q2M2W7 97 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 BAIAP2L2Q6UXY1 529 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 GPX8Q8TED1 209 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 ST6GALNAC5Q9BVH7 336 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 NCOR1P1Q9H4R4 102 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 LINC00312Q9Y6C7 94 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 ABCA1O95477 2261 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 TRGV10A0A0A0MS01 117 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 C12orf77C9JDV5 145 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 CGB3P0DN86 165 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 CGB7P0DN87 165 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 ZNF16P17020 682 aaPredicted RBP20.88■□□□□ 0.93
SSBP3-202ENST00000357475 CORO2AQ92828 525 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 OR6C3Q9NZP0 311 aa20.88■□□□□ 0.93
SSBP3-202ENST00000357475 KIR2DS1A0A191URI9 304 aa20.87■□□□□ 0.93
SSBP3-202ENST00000357475 C15orf65H3BRN8 121 aa20.87■□□□□ 0.93
SSBP3-202ENST00000357475 ENSAO43768 121 aaKnown RBP20.87■□□□□ 0.93
SSBP3-202ENST00000357475 MMP23AO75900 390 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms