RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 ARFGEF2Q9Y6D5 1785 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 CCDC88AQ3V6T2 1871 aa11.34□□□□□ -0.59
SMC4-202ENST00000357388 PLA2G10O15496 165 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 FCARP24071 287 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 NPBWR2P48146 333 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 SPATA46Q5T0L3 261 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 ZNF788Q6ZQV5 615 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 LRRC75AQ8NAA5 344 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 NFAM1Q8NET5 270 aaPredicted RBP11.33□□□□□ -0.6
SMC4-202ENST00000357388 PLA2G3Q9NZ20 509 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 MYH1P12882 1939 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 MYH4Q9Y623 1939 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 ZNF117Q03924 483 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 TEPPQ6URK8 271 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 TMEM183AQ8IXX5 376 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 MBD3L1Q8WWY6 194 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 FAM131CQ96AQ9 280 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 SLC52A3Q9NQ40 469 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 HSF4Q9ULV5 492 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 TMIGD3P0DMS9 266 aaPredicted RBP11.33□□□□□ -0.6
SMC4-202ENST00000357388 FOLR2P14207 255 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 ACER2Q5QJU3 275 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 C1orf210Q8IVY1 113 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 TEX29Q8N6K0 151 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 ZNF764Q96H86 408 aaPredicted RBP11.33□□□□□ -0.6
SMC4-202ENST00000357388 MS4A3Q96HJ5 214 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 ATP6V0CP27449 155 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 GNG10P50151 68 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 GAMTQ14353 236 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 MRPL24Q96A35 216 aaKnown RBP11.33□□□□□ -0.6
SMC4-202ENST00000357388 TCFL5Q9UL49 500 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 CITO14578 2027 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 NALCNQ8IZF0 1738 aa11.33□□□□□ -0.6
SMC4-202ENST00000357388 UCNP55089 124 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 IRF3Q14653 427 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 GVQW1Q8N7I0 195 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 OR5R1Q8NH85 324 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 ALG14Q96F25 216 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 MRGPRX3Q96LB0 322 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 NUDT16L1Q9BRJ7 211 aaKnown RBP11.32□□□□□ -0.6
SMC4-202ENST00000357388 MPDU1O75352 247 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 CD1AP06126 327 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 LGALS7P47929 136 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 TAS2R60P59551 318 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 ISXQ2M1V0 245 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 TGIF2LYQ8IUE0 185 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 Q8WTZ3 238 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 CDX4O14627 284 aaPredicted RBP11.32□□□□□ -0.6
SMC4-202ENST00000357388 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
SMC4-202ENST00000357388 LINC01465Q8N7H1 131 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 KCNMB2Q9Y691 235 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 PPYP01298 95 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 INSL4Q14641 139 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 Q6ZNB5 142 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 MSRB3Q8IXL7 192 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 GPBAR1Q8TDU6 330 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 CCL17Q92583 94 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
SMC4-202ENST00000357388 AMY1AP04745 511 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 NMBP08949 121 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 CD1BP29016 333 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 PSMG4Q5JS54 123 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 WDR34Q96EX3 536 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 CLEC5AQ9NY25 188 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 CES1P1Q9UKY3 287 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 WIPI2Q9Y4P8 454 aa11.32□□□□□ -0.6
SMC4-202ENST00000357388 TRAV38-1A0A0B4J264 116 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 LINC01565O15544 149 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 HLA-DRB1P01911 266 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 UQCRFS1P47985 274 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 MRPS11P82912 194 aaKnown RBP11.31□□□□□ -0.6
SMC4-202ENST00000357388 WDR31Q8NA23 367 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 OR8B3Q8NGG8 313 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 APOBEC4Q8WW27 367 aaKnown RBP11.31□□□□□ -0.6
SMC4-202ENST00000357388 RND1Q92730 232 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 OR8B2Q96RD0 313 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 TREM2Q9NZC2 230 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 ANKRD12Q6UB98 2062 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 F2RL2O00254 374 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 TRGC2P03986 189 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 RAE1P78406 368 aaKnown RBP11.31□□□□□ -0.6
SMC4-202ENST00000357388 RASL11BQ9BPW5 248 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 METTL1Q9UBP6 276 aaKnown RBP11.31□□□□□ -0.6
SMC4-202ENST00000357388 MRM2Q9UI43 246 aaKnown RBP11.31□□□□□ -0.6
SMC4-202ENST00000357388 MGPP08493 103 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 FAM169BQ8N8A8 192 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 OR4X1Q8NH49 305 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 TM4SF19Q96DZ7 209 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 HIST1H4GQ99525 98 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 WDR13Q9H1Z4 485 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 TMEM140Q9NV12 185 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 DLG5Q8TDM6 1919 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 LEPROTL1O95214 131 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 LDLRAD3Q86YD5 345 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 CALHM1Q8IU99 346 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 PUSL1Q8N0Z8 303 aaKnown RBP11.31□□□□□ -0.6
SMC4-202ENST00000357388 C10orf126Q8N4M7 172 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 RNF133Q8WVZ7 376 aa11.31□□□□□ -0.6
SMC4-202ENST00000357388 SRD5A2P31213 254 aa11.3□□□□□ -0.6
SMC4-202ENST00000357388 MFAP2P55001 183 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms