RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 MS4A18Q3C1V0 323 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 STPG1Q5TH74 334 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 OR2A7Q96R45 310 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 MFRPQ9BY79 579 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 TREM2Q9NZC2 230 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 ELOA3CA0A087WX78 387 aaPredicted RBP12.32□□□□□ -0.44
SREBF1-202ENST00000355815 IGHV5-10-1A0A0J9YXX1 117 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 KIR2DS1A0A191URI9 304 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 EIF1BO60739 113 aaKnown RBP12.32□□□□□ -0.44
SREBF1-202ENST00000355815 DTYMKP23919 212 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 EPHA8P29322 1005 aaPredicted RBP12.32□□□□□ -0.44
SREBF1-202ENST00000355815 KIR2DS4P43632 304 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 KIR2DS1Q14954 304 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 ACOT6Q3I5F7 207 aaPredicted RBP12.32□□□□□ -0.44
SREBF1-202ENST00000355815 PRAMEF5Q5TYX0 476 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 PRAMEF6Q5VXH4 476 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 ARHGEF39Q8N4T4 335 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 KLHDC1Q8N7A1 406 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 ZNF524Q96C55 264 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 NMES1Q9C002 83 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 HEXA-AS1Q9H8Q6 139 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 SLC17A5Q9NRA2 495 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 DMRT1Q9Y5R6 373 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 A0A1W2PPC1 479 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 A0A1W2PR77 199 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 SPATA46Q5T0L3 261 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 OR10C1Q96KK4 312 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 SOSTQ9BQB4 213 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 DEFB127Q9H1M4 99 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 PRSS50Q9UI38 385 aa12.32□□□□□ -0.44
SREBF1-202ENST00000355815 MCTS1Q9ULC4 181 aaKnown RBP12.32□□□□□ -0.44
SREBF1-202ENST00000355815 IGLV1-36A0A0B4J1U3 117 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 DXOO77932 396 aaKnown RBP12.31□□□□□ -0.44
SREBF1-202ENST00000355815 MBPP02686 304 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-202ENST00000355815 OPN1MWP04001 364 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 OPN1MW2P0DN77 364 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 OPN1MW3P0DN78 364 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 SLC25A43Q8WUT9 341 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-202ENST00000355815 GFI1Q99684 422 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 PITPNC1Q9UKF7 332 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 A0A1W2PQM1 296 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 CHST1O43916 411 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 CDC14BO60729 498 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 GYPAP02724 150 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 TCTAP57738 103 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 RPL24P83731 157 aaKnown RBP12.31□□□□□ -0.44
SREBF1-202ENST00000355815 UNQ9370/PRO34162Q6UXP9 181 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 TMEM9BQ9NQ34 198 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 PARP11Q9NR21 331 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 TRAF3IP2O43734 574 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-202ENST00000355815 CRYAAP02489 173 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 CRISP2P16562 243 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 CFHR1Q03591 330 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 ISXQ2M1V0 245 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 SLC24A4Q8NFF2 622 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 NAA60Q9H7X0 242 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 KIAA2026Q5HYC2 2103 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 LOC102723971A0A1B0GUV8 181 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 PQLC2LA1A4F0 135 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 DEGS1O15121 323 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 USF1P22415 310 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-202ENST00000355815 SLC35B1P78383 322 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 SHBQ15464 509 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 VHLLQ6RSH7 139 aa12.31□□□□□ -0.44
SREBF1-202ENST00000355815 OR8U8P0C7N1 319 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 TRGC1P0CF51 173 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 HES3Q5TGS1 186 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 SPINK14Q6IE38 97 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 RNASEKQ6P5S7 137 aaKnown RBP12.3□□□□□ -0.44
SREBF1-202ENST00000355815 SMIM15Q7Z3B0 74 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 STARD4Q96DR4 205 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 TMEM204Q9BSN7 226 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 DDA1Q9BW61 102 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 CACNG5Q9UF02 275 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 TRIOO75962 3097 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 C5orf49A4QMS7 147 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 CDX1P47902 265 aaPredicted RBP12.3□□□□□ -0.44
SREBF1-202ENST00000355815 FAM3BP58499 235 aaPredicted RBP12.3□□□□□ -0.44
SREBF1-202ENST00000355815 DMRTA1Q5VZB9 504 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 LINC00114Q6XXX2 140 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 FGF11Q92914 225 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 ARRDC1-AS1Q9H2J1 176 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 ERRFI1Q9UJM3 462 aaPredicted RBP12.3□□□□□ -0.44
SREBF1-202ENST00000355815 ZDHHC8Q9ULC8 765 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 ZFHX2Q9C0A1 2572 aaPredicted RBP12.3□□□□□ -0.44
SREBF1-202ENST00000355815 E9PQ18 207 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 TOX4O94842 621 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 CAMPP49913 170 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 ARG2P78540 354 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 FFAR4Q5NUL3 377 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 KMT5CQ86Y97 462 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 DEFB123Q8N688 67 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 HIPK2Q9H2X6 1198 aa12.3□□□□□ -0.44
SREBF1-202ENST00000355815 ZNF552Q9H707 407 aaPredicted RBP12.3□□□□□ -0.44
SREBF1-202ENST00000355815 TRAV39A0A0B4J263 110 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 TRBV5-5A0A0J9YX44 114 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 ZNF32P17041 273 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 SULT1A2P50226 295 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 C3AR1Q16581 482 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 DHRS7BQ6IAN0 325 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms