RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 G6PCP35575 357 aa15.78■□□□□ 0.12
COL18A1-202ENST00000355480 SLC26A10Q8NG04 563 aa15.78■□□□□ 0.12
COL18A1-202ENST00000355480 ZP3P21754 424 aa15.78■□□□□ 0.12
COL18A1-202ENST00000355480 LINC00052Q96N35 136 aa15.78■□□□□ 0.12
COL18A1-202ENST00000355480 MS4A7Q9GZW8 240 aaPredicted RBP15.78■□□□□ 0.12
COL18A1-202ENST00000355480 MRPS18BQ9Y676 258 aaKnown RBP15.78■□□□□ 0.12
COL18A1-202ENST00000355480 CCL8P80075 99 aa15.77■□□□□ 0.12
COL18A1-202ENST00000355480 ANKRD55Q3KP44 614 aa15.77■□□□□ 0.12
COL18A1-202ENST00000355480 DOLPP1Q86YN1 238 aa15.77■□□□□ 0.12
COL18A1-202ENST00000355480 LPAR3Q9UBY5 353 aa15.77■□□□□ 0.12
COL18A1-202ENST00000355480 ATXN7O15265 892 aaPredicted RBP15.77■□□□□ 0.12
COL18A1-202ENST00000355480 RPL7P18124 248 aaKnown RBP15.77■□□□□ 0.12
COL18A1-202ENST00000355480 PCMT1P22061 227 aa15.77■□□□□ 0.12
COL18A1-202ENST00000355480 RPL31P62899 125 aaKnown RBP15.77■□□□□ 0.12
COL18A1-202ENST00000355480 CCDC144NLQ6NUI1 221 aa15.77■□□□□ 0.12
COL18A1-202ENST00000355480 TOLLIPQ9H0E2 274 aa15.77■□□□□ 0.12
COL18A1-202ENST00000355480 COX6B1P14854 86 aa15.77■□□□□ 0.11
COL18A1-202ENST00000355480 REG1BP48304 166 aa15.77■□□□□ 0.11
COL18A1-202ENST00000355480 PAFAH1B2P68402 229 aa15.77■□□□□ 0.11
COL18A1-202ENST00000355480 MGAT2Q10469 447 aa15.77■□□□□ 0.11
COL18A1-202ENST00000355480 FAM219AQ8IW50 185 aa15.77■□□□□ 0.11
COL18A1-202ENST00000355480 OR4X1Q8NH49 305 aa15.77■□□□□ 0.11
COL18A1-202ENST00000355480 MRGPRFQ96AM1 343 aa15.77■□□□□ 0.11
COL18A1-202ENST00000355480 NPAS1Q99742 590 aa15.77■□□□□ 0.11
COL18A1-202ENST00000355480 MANBALQ9NQG1 85 aa15.77■□□□□ 0.11
COL18A1-202ENST00000355480 OR2W1Q9Y3N9 320 aa15.77■□□□□ 0.11
COL18A1-202ENST00000355480 OR4C45A6NMZ5 311 aa15.77■□□□□ 0.11
COL18A1-202ENST00000355480 SYNGR1O43759 233 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 ADAMTS17Q8TE56 1095 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 DYRK2Q92630 601 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 CHST5Q9GZS9 411 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 OPN3Q9H1Y3 402 aaPredicted RBP15.76■□□□□ 0.11
COL18A1-202ENST00000355480 USP54Q70EL1 1684 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 STRCQ7RTU9 1775 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 A0A1W2PPE3 182 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 CCKARP32238 428 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 WDR73Q6P4I2 378 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 SRD5A3Q9H8P0 318 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 LIPGQ9Y5X9 500 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 CSN3P07498 182 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 COL10A1Q03692 680 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 CLEC2AQ6UVW9 174 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 TMEM116Q8NCL8 245 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 TRBV23-1A0A0A0MS06 115 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 C1QAP02745 245 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 C10orf113Q5VZT2 155 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 KNTC1P50748 2209 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 PLPPR5Q32ZL2 321 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 FDX2Q6P4F2 183 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 SSX8Q7RTT4 187 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 LINC00596Q86U02 117 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 ZNF426Q9BUY5 554 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 SCN1AP35498 2009 aa15.76■□□□□ 0.11
COL18A1-202ENST00000355480 CA11O75493 328 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 ARG1P05089 322 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 C12orf57Q99622 126 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 SLC2A9Q9NRM0 540 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 WIPI2Q9Y4P8 454 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 DUXBA0A1W2PPF3 345 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 NKX2-8O15522 239 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 MBPP02686 304 aaPredicted RBP15.75■□□□□ 0.11
COL18A1-202ENST00000355480 GGTLC2Q14390 218 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 KRTCAP3Q53RY4 240 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 FAM24BQ8N5W8 94 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 PERPQ96FX8 193 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 NUDT16L1Q9BRJ7 211 aaKnown RBP15.75■□□□□ 0.11
COL18A1-202ENST00000355480 CYB5R1Q9UHQ9 305 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 A0A0J9YW62 118 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 RBFOX3A6NFN3 312 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 C11orf94C9JXX5 98 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 RPL36A-HNRNPH2H7BZ11 118 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 CTDSPLO15194 276 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 UPK3AO75631 287 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 CELA2AP08217 269 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 TCL1AP56279 114 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 FAM210BQ96KR6 192 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 MARVELD1Q9BSK0 173 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 PRSS1P07477 247 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 OR1L8Q8NGR8 309 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 FAM222BQ8WU58 562 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 TMPRSS3P57727 454 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 IQCJQ1A5X6 159 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 PHYHIPLQ96FC7 376 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 SEC11CQ9BY50 192 aa15.75■□□□□ 0.11
COL18A1-202ENST00000355480 CDK2AP1O14519 115 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 CRXO43186 299 aaPredicted RBP15.74■□□□□ 0.11
COL18A1-202ENST00000355480 P01737 135 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 SEZ6L2Q6UXD5 910 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 SLC22A18ASQ8N1D0 253 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 IGHV3-21A0A0B4J1V1 117 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 ADRA2AP08913 450 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 ERVS71-1P61550 626 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 LOXL4Q96JB6 756 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 CCL27Q9Y4X3 112 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 COL8A1P27658 744 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 PRDX2P32119 198 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 MRPL24Q96A35 216 aaKnown RBP15.74■□□□□ 0.11
COL18A1-202ENST00000355480 ZNF488Q96MN9 340 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 TRAV8-7A0A075B6U6 113 aa15.74■□□□□ 0.11
COL18A1-202ENST00000355480 IGHV1-45A0A0A0MS14 117 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms