RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 DOCK7Q96N67 2140 aa8.15□□□□□ -1.11
SMG6-202ENST00000354901 MAGT1Q9H0U3 335 aa8.15□□□□□ -1.11
SMG6-202ENST00000354901 NAGKQ9UJ70 344 aa8.15□□□□□ -1.11
SMG6-202ENST00000354901 C19orf67A6NJJ6 358 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 TRAF3IP2O43734 574 aaPredicted RBP8.14□□□□□ -1.11
SMG6-202ENST00000354901 CDC14BO60729 498 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 CST7O76096 145 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 ONECUT2O95948 504 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 TK1P04183 234 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 MELTFP08582 738 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 SRP19P09132 144 aaKnown RBP8.14□□□□□ -1.11
SMG6-202ENST00000354901 FAHP16930 419 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 ZNF16P17020 682 aaPredicted RBP8.14□□□□□ -1.11
SMG6-202ENST00000354901 GNB2P62879 340 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 HIKESHIQ53FT3 197 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 ZNF573Q86YE8 665 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 IL22RA1Q8N6P7 574 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 SCRT1Q9BWW7 348 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 MRPL13Q9BYD1 178 aaKnown RBP8.14□□□□□ -1.11
SMG6-202ENST00000354901 DKKL1Q9UK85 242 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 RARRES3Q9UL19 164 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 ZFAND5O76080 213 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 GCGP01275 180 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 DBHP09172 617 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 EPHA1P21709 976 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 GUCA1AP43080 201 aaPredicted RBP8.14□□□□□ -1.11
SMG6-202ENST00000354901 NOVA1P51513 510 aaKnown RBP8.14□□□□□ -1.11
SMG6-202ENST00000354901 CCL7P80098 99 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 RTP5Q14D33 572 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 MMDQ15546 238 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 PHLDA2Q53GA4 152 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 CALHM1Q8IU99 346 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 ZNF709Q8N972 641 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 DNASE2BQ8WZ79 361 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 PCGF1Q9BSM1 259 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 RBM24Q9BX46 236 aaKnown RBP8.14□□□□□ -1.11
SMG6-202ENST00000354901 ACTR3CQ9C0K3 210 aaPredicted RBP8.14□□□□□ -1.11
SMG6-202ENST00000354901 RNF150Q9ULK6 438 aa8.14□□□□□ -1.11
SMG6-202ENST00000354901 A0A1W2PQM1 296 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 FAM24AA6NFZ4 105 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 TMEM14DPA8MWL7 114 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 HIST1H1DP16402 221 aaKnown RBP8.13□□□□□ -1.11
SMG6-202ENST00000354901 BLVRBP30043 206 aaPredicted RBP8.13□□□□□ -1.11
SMG6-202ENST00000354901 CEACAM6P40199 344 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 TAF9Q16594 264 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 HOGA1Q86XE5 327 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 OR5L2Q8NGL0 311 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 VN1R17PQ8TDU5 208 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 GAL3ST2Q9H3Q3 398 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 PLEKHA2Q9HB19 425 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 ZNF160Q9HCG1 818 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 AURKAIP1Q9NWT8 199 aaPredicted RBP8.13□□□□□ -1.11
SMG6-202ENST00000354901 IGKV1-9A0A0C4DH69 117 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 HLA-HP01893 362 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 ZNF17P17021 662 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 GABRR1P24046 479 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 CXCL12P48061 93 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 RAET1LQ5VY80 246 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 DPPA3Q6W0C5 159 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 TMPRSS7Q7RTY8 843 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 DTX1Q86Y01 620 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 OR4C5Q8NGB2 326 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 KCNG3Q8TAE7 436 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 PTX4Q96A99 478 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 RPUSD4Q96CM3 377 aaKnown RBP8.13□□□□□ -1.11
SMG6-202ENST00000354901 NUDT11Q96G61 164 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 UCN2Q96RP3 112 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 RASL10BQ96S79 203 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 SHANK1Q9Y566 2161 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 COL6A3P12111 3177 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 HMGB3O15347 200 aaKnown RBP8.13□□□□□ -1.11
SMG6-202ENST00000354901 PTGDSP41222 190 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 ENDOGQ14249 297 aaKnown RBP8.13□□□□□ -1.11
SMG6-202ENST00000354901 FBXW12Q6X9E4 464 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 BATF2Q8N1L9 274 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 HDHD3Q9BSH5 251 aaPredicted RBP8.13□□□□□ -1.11
SMG6-202ENST00000354901 OCIAD1Q9NX40 245 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 ARHGAP21Q5T5U3 1957 aa8.13□□□□□ -1.11
SMG6-202ENST00000354901 FAM230AA0A1W2PPH8 454 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 CCL25O15444 150 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 FCGR2AP12318 317 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 LMO1P25800 156 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 ATP6V0CP27449 155 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 PTGER4P35408 488 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 SNU13P55769 128 aaKnown RBP8.12□□□□□ -1.11
SMG6-202ENST00000354901 CHRFAM7AQ494W8 412 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 COL5A1-AS1Q5SY13 56 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 WDR74Q6RFH5 385 aaPredicted RBP8.12□□□□□ -1.11
SMG6-202ENST00000354901 LFNGQ8NES3 379 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 NUDT10Q8NFP7 164 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 OR13D1Q8NGV5 346 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 OR13G1Q8NGZ3 307 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 CIB3Q96Q77 187 aaPredicted RBP8.12□□□□□ -1.11
SMG6-202ENST00000354901 ALKBH3Q96Q83 286 aaPredicted RBP8.12□□□□□ -1.11
SMG6-202ENST00000354901 OR5B12Q96R08 314 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 TXN2Q99757 166 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 ALKBH7Q9BT30 221 aaPredicted RBP8.12□□□□□ -1.11
SMG6-202ENST00000354901 FAM103A1Q9BTL3 118 aaKnown RBP8.12□□□□□ -1.11
SMG6-202ENST00000354901 ARV1Q9H2C2 271 aa8.12□□□□□ -1.11
SMG6-202ENST00000354901 GPR132Q9UNW8 380 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms