RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 COQ2Q96H96 371 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 ZNF665Q9H7R5 613 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 DLL4Q9NR61 685 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 NECAP2Q9NVZ3 263 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 TRAPPC2LQ9UL33 140 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 AKAP6Q13023 2319 aa13.03□□□□□ -0.32
CTSA-202ENST00000354880 TRDCB7Z8K6 153 aa13.02□□□□□ -0.32
CTSA-202ENST00000354880 LYNX1G3V0Z9 82 aa13.02□□□□□ -0.32
CTSA-202ENST00000354880 H2AFB2P0C5Z0 115 aa13.02□□□□□ -0.32
CTSA-202ENST00000354880 LYNX1P0DP58 116 aa13.02□□□□□ -0.32
CTSA-202ENST00000354880 COX6B1P14854 86 aa13.02□□□□□ -0.32
CTSA-202ENST00000354880 RAB25P57735 213 aa13.02□□□□□ -0.32
CTSA-202ENST00000354880 PAX5Q02548 391 aa13.02□□□□□ -0.32
CTSA-202ENST00000354880 KRBOX4Q5JUW0 171 aa13.02□□□□□ -0.32
CTSA-202ENST00000354880 ATPAF1Q5TC12 328 aaPredicted RBP13.02□□□□□ -0.32
CTSA-202ENST00000354880 SP5Q6BEB4 398 aaPredicted RBP13.02□□□□□ -0.32
CTSA-202ENST00000354880 GAFA1Q96PS6 74 aa13.02□□□□□ -0.32
CTSA-202ENST00000354880 CCL13Q99616 98 aa13.02□□□□□ -0.32
CTSA-202ENST00000354880 SLC25A21Q9BQT8 299 aaPredicted RBP13.02□□□□□ -0.32
CTSA-202ENST00000354880 PLEKHF2Q9H8W4 249 aa13.02□□□□□ -0.32
CTSA-202ENST00000354880 MGAT4AQ9UM21 535 aa13.02□□□□□ -0.32
CTSA-202ENST00000354880 FLVCR2Q9UPI3 526 aa13.02□□□□□ -0.32
CTSA-202ENST00000354880 KIAA2026Q5HYC2 2103 aa13.02□□□□□ -0.33
CTSA-202ENST00000354880 USF3Q68DE3 2245 aa13.02□□□□□ -0.33
CTSA-202ENST00000354880 MGST3O14880 152 aa13.02□□□□□ -0.33
CTSA-202ENST00000354880 TK1P04183 234 aa13.02□□□□□ -0.33
CTSA-202ENST00000354880 OR5H8P0DN80 308 aa13.02□□□□□ -0.33
CTSA-202ENST00000354880 CDKN1AP38936 164 aa13.02□□□□□ -0.33
CTSA-202ENST00000354880 RAG2P55895 527 aa13.02□□□□□ -0.33
CTSA-202ENST00000354880 MRPS11P82912 194 aaKnown RBP13.02□□□□□ -0.33
CTSA-202ENST00000354880 OR13C8Q8NGS7 320 aa13.02□□□□□ -0.33
CTSA-202ENST00000354880 DNTTIP1Q9H147 329 aa13.02□□□□□ -0.33
CTSA-202ENST00000354880 MBNL3Q9NUK0 354 aaKnown RBP13.02□□□□□ -0.33
CTSA-202ENST00000354880 KIF25Q9UIL4 384 aa13.02□□□□□ -0.33
CTSA-202ENST00000354880 MEIKINA0A087WXM9 373 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 TRAV39A0A0B4J263 110 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 NKX6-3A6NJ46 265 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 ARPC1BO15143 372 aaKnown RBP13.01□□□□□ -0.33
CTSA-202ENST00000354880 SIGLEC5O15389 551 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 TMPRSS2O15393 492 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 FABP7O15540 132 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 RP2O75695 350 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 DHFRP00374 187 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 SCTP09683 121 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 SELLP14151 372 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 BTG1P62324 171 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 IL13RA1P78552 427 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 HLA-DRB3P79483 266 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 EDDM3AQ14507 147 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 TATDN3Q17R31 274 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 OR5D13Q8NGL4 314 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 TERB2Q8NHR7 220 aa13.01□□□□□ -0.33
CTSA-202ENST00000354880 MYOZ1Q9NP98 299 aaPredicted RBP13.01□□□□□ -0.33
CTSA-202ENST00000354880 USP9YO00507 2555 aaPredicted RBP13.01□□□□□ -0.33
CTSA-202ENST00000354880 A0A1B0GW55 424 aa13□□□□□ -0.33
CTSA-202ENST00000354880 LY6HO94772 140 aa13□□□□□ -0.33
CTSA-202ENST00000354880 DUX4L2P0CJ85 424 aa13□□□□□ -0.33
CTSA-202ENST00000354880 DUX4L3P0CJ86 424 aa13□□□□□ -0.33
CTSA-202ENST00000354880 DUX4L4P0CJ87 422 aa13□□□□□ -0.33
CTSA-202ENST00000354880 DUX4L5P0CJ88 424 aa13□□□□□ -0.33
CTSA-202ENST00000354880 DUX4L6P0CJ89 424 aa13□□□□□ -0.33
CTSA-202ENST00000354880 DUX4L7P0CJ90 424 aa13□□□□□ -0.33
CTSA-202ENST00000354880 DAOP14920 347 aa13□□□□□ -0.33
CTSA-202ENST00000354880 GLIPR1P48060 266 aa13□□□□□ -0.33
CTSA-202ENST00000354880 KCNJ8Q15842 424 aa13□□□□□ -0.33
CTSA-202ENST00000354880 IGSF11Q5DX21 431 aa13□□□□□ -0.33
CTSA-202ENST00000354880 DUX4L9Q6RFH8 374 aaPredicted RBP13□□□□□ -0.33
CTSA-202ENST00000354880 FAM216BQ8N7L0 139 aa13□□□□□ -0.33
CTSA-202ENST00000354880 TPRX1Q8N7U7 411 aa13□□□□□ -0.33
CTSA-202ENST00000354880 TMEM185AQ8NFB2 350 aa13□□□□□ -0.33
CTSA-202ENST00000354880 OR6F1Q8NGZ6 308 aa13□□□□□ -0.33
CTSA-202ENST00000354880 FAM234AQ9H0X4 552 aa13□□□□□ -0.33
CTSA-202ENST00000354880 DUX4Q9UBX2 424 aa13□□□□□ -0.33
CTSA-202ENST00000354880 A0A0B4J293 547 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 FUOMA2VDF0 154 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 PEX14O75381 377 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 FSTL3O95633 263 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 SEC61A1P61619 476 aaKnown RBP12.99□□□□□ -0.33
CTSA-202ENST00000354880 DHRS11Q6UWP2 260 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 SLC36A1Q7Z2H8 476 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 C5orf24Q7Z6I8 188 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 PEG10Q86TG7 708 aaKnown RBP12.99□□□□□ -0.33
CTSA-202ENST00000354880 LHFPL1Q86WI0 220 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 OR4A4PQ8NGN8 299 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 MRGPRFQ96AM1 343 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 MED30Q96HR3 178 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 ZNF2Q9BSG1 426 aaPredicted RBP12.99□□□□□ -0.33
CTSA-202ENST00000354880 TNFRSF13BO14836 293 aaPredicted RBP12.99□□□□□ -0.33
CTSA-202ENST00000354880 BET1O15155 118 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 NDUFA2O43678 99 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 RLN1P04808 185 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 CTXN2P0C2S0 81 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 GLP1RP43220 463 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 BCAP31P51572 246 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 HERPUD1Q15011 391 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 AADACL3Q5VUY0 350 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 ZNF660Q6AZW8 331 aaPredicted RBP12.99□□□□□ -0.33
CTSA-202ENST00000354880 CADM3Q8N126 398 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 TMEM246Q9BRR3 403 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 TAF9BQ9HBM6 251 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms