RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 APH1AQ96BI3 265 aa16.75■□□□□ 0.27
COL13A1-201ENST00000354547 PUS1Q9Y606 427 aaKnown RBP eCLIP16.75■□□□□ 0.27
COL13A1-201ENST00000354547 A6NLC8 198 aa16.74■□□□□ 0.27
COL13A1-201ENST00000354547 C9orf172C9J069 976 aa16.74■□□□□ 0.27
COL13A1-201ENST00000354547 NUFIP2Q7Z417 695 aaKnown RBP16.74■□□□□ 0.27
COL13A1-201ENST00000354547 TECTBQ96PL2 329 aa16.74■□□□□ 0.27
COL13A1-201ENST00000354547 TTTY12Q9BZ98 90 aa16.74■□□□□ 0.27
COL13A1-201ENST00000354547 ARGFXA6NJG6 315 aa16.74■□□□□ 0.27
COL13A1-201ENST00000354547 HEXAP06865 529 aa16.74■□□□□ 0.27
COL13A1-201ENST00000354547 P4HA3Q7Z4N8 544 aa16.74■□□□□ 0.27
COL13A1-201ENST00000354547 ARRDC1-AS1Q9H2J1 176 aa16.74■□□□□ 0.27
COL13A1-201ENST00000354547 KCNJ16Q9NPI9 418 aa16.74■□□□□ 0.27
COL13A1-201ENST00000354547 B4GALT7Q9UBV7 327 aa16.74■□□□□ 0.27
COL13A1-201ENST00000354547 CD300LBA8K4G0 201 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 WRBO00258 174 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 OR2T2Q6IF00 324 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 MCEMP1Q8IX19 187 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 LILRB1Q8NHL6 650 aaPredicted RBP16.73■□□□□ 0.27
COL13A1-201ENST00000354547 APOBEC3DQ96AK3 386 aaPredicted RBP16.73■□□□□ 0.27
COL13A1-201ENST00000354547 SCRT1Q9BWW7 348 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 CACNA1DQ01668 2161 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 hCG_1809904A0A1W2PP81 198 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 A0A1W2PR64 198 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 A0A1W2PRV1 198 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 TMEM50AO95807 157 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 HOXA1P49639 335 aaPredicted RBP16.73■□□□□ 0.27
COL13A1-201ENST00000354547 DYNLT3P51808 116 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 TMEM252Q8N6L7 170 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 SUMF2Q8NBJ7 301 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 HIST1H2BAQ96A08 127 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 TMEM45BQ96B21 275 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 GLRX2Q9NS18 164 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 PRSS50Q9UI38 385 aa16.73■□□□□ 0.27
COL13A1-201ENST00000354547 A0A1W2PR80 420 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 PROB1E7EW31 1015 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 NAPSAO96009 420 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 CA6P23280 308 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 HABP2Q14520 560 aaPredicted RBP16.72■□□□□ 0.27
COL13A1-201ENST00000354547 FAM24BQ8N5W8 94 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 TMEM251Q8N6I4 163 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 STRADBQ9C0K7 418 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 CHST1O43916 411 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 RHBDL1O75783 438 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 CDS2O95674 445 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 PLP2Q04941 152 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 ZNF154Q13106 437 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 HAGHQ16775 308 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 SHEQ5VZ18 495 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 MYPOPQ86VE0 399 aaPredicted RBP16.72■□□□□ 0.27
COL13A1-201ENST00000354547 RNASE11Q8TAA1 199 aaKnown RBP16.72■□□□□ 0.27
COL13A1-201ENST00000354547 TAAR9Q96RI9 348 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 PLSCR2Q9NRY7 297 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 TECTAO75443 2155 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 A0A1W2PPE2 198 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 SLC34A2O95436 690 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 RAB5BP61020 215 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 MED12LQ86YW9 2145 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 SFT2D1Q8WV19 159 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 BCL2L14Q9BZR8 327 aa16.72■□□□□ 0.27
COL13A1-201ENST00000354547 ACP1P24666 158 aa16.71■□□□□ 0.27
COL13A1-201ENST00000354547 PEAR1Q5VY43 1037 aaPredicted RBP16.71■□□□□ 0.27
COL13A1-201ENST00000354547 CMTM1Q8IZ96 169 aa16.71■□□□□ 0.27
COL13A1-201ENST00000354547 ERRFI1Q9UJM3 462 aaPredicted RBP16.71■□□□□ 0.27
COL13A1-201ENST00000354547 IGKV3D-15A0A087WSY6 115 aa16.71■□□□□ 0.27
COL13A1-201ENST00000354547 ZNF16P17020 682 aaPredicted RBP16.71■□□□□ 0.27
COL13A1-201ENST00000354547 ADAM5Q6NVV9 412 aa16.71■□□□□ 0.27
COL13A1-201ENST00000354547 DEFB127Q9H1M4 99 aa16.71■□□□□ 0.27
COL13A1-201ENST00000354547 PLEKHF2Q9H8W4 249 aa16.71■□□□□ 0.27
COL13A1-201ENST00000354547 KLF2Q9Y5W3 355 aaPredicted RBP16.71■□□□□ 0.27
COL13A1-201ENST00000354547 PRR14LQ5THK1 2151 aa16.71■□□□□ 0.27
COL13A1-201ENST00000354547 A0A1W2PNU3 283 aaPredicted RBP16.7■□□□□ 0.26
COL13A1-201ENST00000354547 C1orf196B1AJZ1 125 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 FBP1P09467 338 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 SRPXP78539 464 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 TMEM56Q96MV1 263 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 SPIN2AQ99865 258 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 SPIN2BQ9BPZ2 258 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 MRPS18CQ9Y3D5 142 aaKnown RBP16.7■□□□□ 0.26
COL13A1-201ENST00000354547 TMEM56-RWDD3S4R434 201 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 ANKRD30BLA7E2S9 258 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 ATXN7O15265 892 aaPredicted RBP16.7■□□□□ 0.26
COL13A1-201ENST00000354547 S100A6P06703 90 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 OR2B8PP59922 312 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 FAM180AQ6UWF9 173 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 FAM185AQ8N0U4 392 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 POM121L2Q96KW2 1035 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 PBDC1Q9BVG4 233 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 SLC35B3Q9H1N7 401 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 IL17BQ9UHF5 180 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 STRAPQ9Y3F4 350 aaKnown RBP16.7■□□□□ 0.26
COL13A1-201ENST00000354547 ATP23Q9Y6H3 246 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 A0A0G2JRQ6 117 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 K7N7A8 449 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 ZNF266Q14584 549 aa16.7■□□□□ 0.26
COL13A1-201ENST00000354547 RBM7Q9Y580 266 aaKnown RBP16.7■□□□□ 0.26
COL13A1-201ENST00000354547 KIR2DS1A0A191URI9 304 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 A0A1W2PPE3 182 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 PGLYRP1O75594 196 aaPredicted RBP16.69■□□□□ 0.26
COL13A1-201ENST00000354547 PTAFRP25105 342 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 KIR2DS4P43632 304 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms