RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ZNF880Q6PDB4 577 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 PCSK4Q6UW60 755 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 OR2C3Q8N628 320 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 LILRB1Q8NHL6 650 aaPredicted RBP18.89■□□□□ 0.61
UPF3A-201ENST00000351487 WDYHV1Q96HA8 205 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 C12orf49Q9H741 205 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 IFT22Q9H7X7 185 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 GP6Q9HCN6 339 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 NCOR1O75376 2440 aa18.88■□□□□ 0.61
UPF3A-201ENST00000351487 C9JQL5 133 aa18.88■□□□□ 0.61
UPF3A-201ENST00000351487 TSPAN9O75954 239 aa18.88■□□□□ 0.61
UPF3A-201ENST00000351487 SLC34A2O95436 690 aa18.88■□□□□ 0.61
UPF3A-201ENST00000351487 PVALBP20472 110 aaPredicted RBP18.88■□□□□ 0.61
UPF3A-201ENST00000351487 NMSQ5H8A3 153 aa18.88■□□□□ 0.61
UPF3A-201ENST00000351487 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.88■□□□□ 0.61
UPF3A-201ENST00000351487 STRAPQ9Y3F4 350 aaKnown RBP18.88■□□□□ 0.61
UPF3A-201ENST00000351487 TRAV24A0A0B4J272 114 aa18.88■□□□□ 0.61
UPF3A-201ENST00000351487 H7C2Y5 167 aa18.88■□□□□ 0.61
UPF3A-201ENST00000351487 TSPAN15O95858 294 aa18.88■□□□□ 0.61
UPF3A-201ENST00000351487 MIDNQ504T8 468 aa18.88■□□□□ 0.61
UPF3A-201ENST00000351487 FAM76BQ5HYJ3 339 aa18.88■□□□□ 0.61
UPF3A-201ENST00000351487 FAM58AQ8N1B3 248 aa18.88■□□□□ 0.61
UPF3A-201ENST00000351487 IL22RA2Q969J5 263 aa18.88■□□□□ 0.61
UPF3A-201ENST00000351487 H0Y980 276 aa18.87■□□□□ 0.61
UPF3A-201ENST00000351487 LMO1P25800 156 aa18.87■□□□□ 0.61
UPF3A-201ENST00000351487 SNCAP37840 140 aa18.87■□□□□ 0.61
UPF3A-201ENST00000351487 MDP1Q86V88 176 aa18.87■□□□□ 0.61
UPF3A-201ENST00000351487 ZNF488Q96MN9 340 aa18.87■□□□□ 0.61
UPF3A-201ENST00000351487 OR51I2Q9H344 312 aa18.87■□□□□ 0.61
UPF3A-201ENST00000351487 CCL28Q9NRJ3 127 aa18.87■□□□□ 0.61
UPF3A-201ENST00000351487 CACFD1Q9UGQ2 172 aa18.87■□□□□ 0.61
UPF3A-201ENST00000351487 J3QW42 95 aa18.86■□□□□ 0.61
UPF3A-201ENST00000351487 VDAC1P21796 283 aa18.86■□□□□ 0.61
UPF3A-201ENST00000351487 C20orf204Q6ZNR8 217 aa18.86■□□□□ 0.61
UPF3A-201ENST00000351487 CMTM1Q8IZ96 169 aa18.86■□□□□ 0.61
UPF3A-201ENST00000351487 CABLES2Q9BTV7 478 aa18.86■□□□□ 0.61
UPF3A-201ENST00000351487 SCRT1Q9BWW7 348 aa18.86■□□□□ 0.61
UPF3A-201ENST00000351487 SH3BGRL3Q9H299 93 aa18.86■□□□□ 0.61
UPF3A-201ENST00000351487 SPRR3Q9UBC9 169 aa18.86■□□□□ 0.61
UPF3A-201ENST00000351487 IL22RA1Q8N6P7 574 aa18.86■□□□□ 0.61
UPF3A-201ENST00000351487 OR5D13Q8NGL4 314 aa18.86■□□□□ 0.61
UPF3A-201ENST00000351487 PARP12Q9H0J9 701 aaKnown RBP18.86■□□□□ 0.61
UPF3A-201ENST00000351487 DEFB127Q9H1M4 99 aa18.86■□□□□ 0.61
UPF3A-201ENST00000351487 LYRM2Q9NU23 88 aaPredicted RBP18.86■□□□□ 0.61
UPF3A-201ENST00000351487 PRELID3BQ9Y3B1 194 aa18.86■□□□□ 0.61
UPF3A-201ENST00000351487 KPTNQ9Y664 436 aa18.86■□□□□ 0.61
UPF3A-201ENST00000351487 TRGV5A0A0B4J1U4 118 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 J3QT63 122 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 ADAM20O43506 726 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 PITX3O75364 302 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 CAMLGP49069 296 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 POLR2GP62487 172 aaKnown RBP eCLIP18.85■□□□□ 0.61
UPF3A-201ENST00000351487 HLA-DRB3P79483 266 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 ZNF266Q14584 549 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 OR2T2Q6IF00 324 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 HSD17B6O14756 317 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 ZNF616Q08AN1 781 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 TGIF1Q15583 401 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 HMGN3Q15651 99 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 ZNF324BQ6AW86 544 aaPredicted RBP18.85■□□□□ 0.61
UPF3A-201ENST00000351487 HSD17B11Q8NBQ5 300 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 ZDHHC11Q9H8X9 412 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 C19orf12Q9NSK7 152 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 DLL3Q9NYJ7 618 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 ZNF175Q9Y473 711 aa18.85■□□□□ 0.61
UPF3A-201ENST00000351487 MED12LQ86YW9 2145 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 IGSF23A1L1A6 192 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 FAM24AA6NFZ4 105 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 MMP9P14780 707 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 CA6P23280 308 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 RNFT1Q5M7Z0 435 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 H1FOOQ8IZA3 346 aaPredicted RBP18.84■□□□□ 0.61
UPF3A-201ENST00000351487 C17orf78Q8N4C9 275 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 SUMF1Q8NBK3 374 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 RDH5Q92781 318 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 OR51B6Q9H340 312 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 PLEKHF2Q9H8W4 249 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 OR2W1Q9Y3N9 320 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 FAM186AA6NE01 2351 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 NPIPB11E5RHQ5 1161 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 HS3ST1O14792 307 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 PGLYRP1O75594 196 aaPredicted RBP18.84■□□□□ 0.61
UPF3A-201ENST00000351487 WNT2P09544 360 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 ID3Q02535 119 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 ZNF766Q5HY98 468 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 GPHA2Q96T91 129 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 SLC25A31Q9H0C2 315 aa18.84■□□□□ 0.61
UPF3A-201ENST00000351487 RHBDL1O75783 438 aa18.83■□□□□ 0.6
UPF3A-201ENST00000351487 FHITP49789 147 aa18.83■□□□□ 0.6
UPF3A-201ENST00000351487 TBC1D28Q2M2D7 210 aa18.83■□□□□ 0.6
UPF3A-201ENST00000351487 TMEM252Q8N6L7 170 aa18.83■□□□□ 0.6
UPF3A-201ENST00000351487 K7N7A8 449 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 DEGS1O15121 323 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 NDUFA2O43678 99 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 SSSCA1O60232 199 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 F2RP25116 425 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 NFYBP25208 207 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 PEA15Q15121 130 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 GUK1Q16774 197 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 CXorf66Q5JRM2 361 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms