RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 OR8H1Q8NGG4 311 aa5.85□□□□□ -1.47
TRIM55-203ENST00000350034 OR4A4PQ8NGN8 299 aa5.85□□□□□ -1.47
TRIM55-203ENST00000350034 PRR7Q8TB68 274 aa5.85□□□□□ -1.47
TRIM55-203ENST00000350034 PPP1R1CQ8WVI7 109 aa5.85□□□□□ -1.47
TRIM55-203ENST00000350034 RDH5Q92781 318 aa5.85□□□□□ -1.47
TRIM55-203ENST00000350034 SNRNP40Q96DI7 357 aaKnown RBP5.85□□□□□ -1.47
TRIM55-203ENST00000350034 SEC22AQ96IW7 307 aa5.85□□□□□ -1.47
TRIM55-203ENST00000350034 C2orf50Q96LR7 162 aa5.85□□□□□ -1.47
TRIM55-203ENST00000350034 KRTAP3-3Q9BYR6 98 aa5.85□□□□□ -1.47
TRIM55-203ENST00000350034 KRTAP3-2Q9BYR7 98 aa5.85□□□□□ -1.47
TRIM55-203ENST00000350034 MFFQ9GZY8 342 aa5.85□□□□□ -1.47
TRIM55-203ENST00000350034 NAA60Q9H7X0 242 aa5.85□□□□□ -1.47
TRIM55-203ENST00000350034 TMEM165Q9HC07 324 aa5.85□□□□□ -1.47
TRIM55-203ENST00000350034 CHMP1AQ9HD42 196 aaPredicted RBP5.85□□□□□ -1.47
TRIM55-203ENST00000350034 MBNL3Q9NUK0 354 aaKnown RBP5.85□□□□□ -1.47
TRIM55-203ENST00000350034 Q9UFV3 132 aa5.85□□□□□ -1.47
TRIM55-203ENST00000350034 CREBBPQ92793 2442 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 A0A0D9SG52 128 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 LINC00862A6NCI5 91 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 RNF222A6NCQ9 220 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 C5orf51A6NDU8 294 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 TUBAL3A6NHL2 446 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 MPTX1A8MV57 137 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 EEF1E1-BLOC1S5C9J1V9 151 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 H0YIZ8 118 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 H7C1Q1 480 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 M0R1B8 84 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 HS3ST1O14792 307 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 SH2D1BO14796 132 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 TSC22D2O75157 780 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 ADAP1O75689 374 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 B3GALNT1O75752 331 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 NXPH2O95156 264 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 HAND1O96004 215 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 IFNA7P01567 189 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 TK1P04183 234 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 GRPP07492 148 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 WNT2P09544 360 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF44P15621 663 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 PSMB6P28072 239 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 GNRHRP30968 328 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 RBMXP38159 391 aaKnown RBP5.84□□□□□ -1.47
TRIM55-203ENST00000350034 HERV-K104P61576 105 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 HLA-DRB3P79483 266 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 FAM27E3Q08E93 113 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 EXOSC2Q13868 293 aaKnown RBP5.84□□□□□ -1.47
TRIM55-203ENST00000350034 HMGN3Q15651 99 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 PRR30Q53SZ7 412 aaPredicted RBP5.84□□□□□ -1.47
TRIM55-203ENST00000350034 PAN3Q58A45 887 aaKnown RBP5.84□□□□□ -1.47
TRIM55-203ENST00000350034 CLLU1Q5K131 121 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 WDR82Q6UXN9 313 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 ACP7Q6ZNF0 438 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF497Q6ZNH5 498 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF826PQ6ZT77 177 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 C22orf34Q6ZV56 151 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 SSX8Q7RTT4 187 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 C5orf24Q7Z6I8 188 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF546Q86UE3 836 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 H1FOOQ8IZA3 346 aaPredicted RBP5.84□□□□□ -1.47
TRIM55-203ENST00000350034 OR10Z1Q8NGY1 313 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 PLPPR1Q8TBJ4 325 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 TMEM171Q8WVE6 324 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 RTN4IP1Q8WWV3 396 aaPredicted RBP5.84□□□□□ -1.47
TRIM55-203ENST00000350034 MSI2Q96DH6 328 aaKnown RBP5.84□□□□□ -1.47
TRIM55-203ENST00000350034 MUCL1Q96DR8 90 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 C18orf12Q96KH6 178 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 OR10C1Q96KK4 312 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 DMRTA2Q96SC8 542 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 PDCD10Q9BUL8 212 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 SUCNR1Q9BXA5 334 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 SLC2A9Q9NRM0 540 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 ASF1BQ9NVP2 202 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 C1orf123Q9NWV4 160 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 RASL12Q9NYN1 266 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 RDH8Q9NYR8 311 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 PRR13Q9NZ81 148 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 COMMD9Q9P000 198 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 PCDHB10Q9UN67 800 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 WIPI2Q9Y4P8 454 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 SPEF1Q9Y4P9 236 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 AUP1Q9Y679 476 aa5.84□□□□□ -1.47
TRIM55-203ENST00000350034 IGKV1D-13A0A0B4J2D9 117 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 TEX13DA0A0J9YY54 714 aaPredicted RBP5.83□□□□□ -1.48
TRIM55-203ENST00000350034 C13orf42A0A1B0GVH6 325 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 ZSCAN5BA6NJL1 495 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 FAM25EA8MYX2 175 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 C16orf97H3BN30 126 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.83□□□□□ -1.48
TRIM55-203ENST00000350034 IFNL4K9M1U5 179 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 SIRPB1O00241 398 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 HSPB6O14558 160 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 WNT9BO14905 357 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 MPPED1O15442 326 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 CRYAAP02489 173 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 OR5AC1P0C628 307 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 FAM87AP0C7U9 286 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 IGKV1-13P0DP09 117 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 RCC1P18754 421 aaPredicted RBP5.83□□□□□ -1.48
TRIM55-203ENST00000350034 CD40P25942 277 aa5.83□□□□□ -1.48
TRIM55-203ENST00000350034 FXYD4P59646 89 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms