RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 IFNA2P01563 188 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 PRH1P02810 166 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 SLC25A4P12235 298 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 FUT3P21217 361 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 EPHA1P21709 976 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 TAS2R31P59538 309 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 LPCAT3Q6P1A2 487 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 LYZL2Q7Z4W2 148 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 FAM24BQ8N5W8 94 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 POM121L2Q96KW2 1035 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 OPN3Q9H1Y3 402 aaPredicted RBP11.91□□□□□ -0.5
TRIM4-201ENST00000349062 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRIM4-201ENST00000349062 H0YL77 283 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 OMGP23515 440 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 ARR3P36575 388 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 ACTBL2Q562R1 376 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 VAX1Q5SQQ9 334 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 RPRMLQ8N4K4 120 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 SCGB3A2Q96PL1 93 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 REPIN1Q9BWE0 567 aaKnown RBP11.91□□□□□ -0.5
TRIM4-201ENST00000349062 MAGT1Q9H0U3 335 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 RGCCQ9H4X1 137 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 TAF9BQ9HBM6 251 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 SLC2A8Q9NY64 477 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 AMDHD2Q9Y303 409 aa11.91□□□□□ -0.5
TRIM4-201ENST00000349062 IGKV3D-15A0A087WSY6 115 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 LPAR6P43657 344 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 HNF4GQ14541 408 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 OR1K1Q8NGR3 316 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 OR51H1Q8NH63 302 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 ZNF71Q9NQZ8 489 aaPredicted RBP11.9□□□□□ -0.5
TRIM4-201ENST00000349062 MMP26Q9NRE1 261 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 SMCO4Q9NRQ5 59 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 OSGIN2Q9Y236 505 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 KLF2Q9Y5W3 355 aaPredicted RBP11.9□□□□□ -0.5
TRIM4-201ENST00000349062 DOCK11Q5JSL3 2073 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 A0A1W2PPH5 198 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 C9JQL5 133 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 K7EM74 188 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 IGHV3-13P01766 116 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 IGHV3-7P01780 117 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 IGHV1-2P23083 117 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 Q6ZRG5 221 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 ZNF565Q8N9K5 539 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 C9orf106Q8NAJ2 232 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 TREM2Q9NZC2 230 aa11.9□□□□□ -0.5
TRIM4-201ENST00000349062 TBPP20226 339 aa11.9□□□□□ -0.51
TRIM4-201ENST00000349062 PTAFRP25105 342 aa11.9□□□□□ -0.51
TRIM4-201ENST00000349062 HABP2Q14520 560 aaPredicted RBP11.9□□□□□ -0.51
TRIM4-201ENST00000349062 OR8B8Q15620 311 aa11.9□□□□□ -0.51
TRIM4-201ENST00000349062 OR2A2Q6IF42 318 aa11.9□□□□□ -0.51
TRIM4-201ENST00000349062 TPRX1Q8N7U7 411 aa11.9□□□□□ -0.51
TRIM4-201ENST00000349062 RNASE11Q8TAA1 199 aaKnown RBP11.9□□□□□ -0.51
TRIM4-201ENST00000349062 SLC25A40Q8TBP6 338 aa11.9□□□□□ -0.51
TRIM4-201ENST00000349062 TMEM45BQ96B21 275 aa11.9□□□□□ -0.51
TRIM4-201ENST00000349062 RNF126Q9BV68 326 aa11.9□□□□□ -0.51
TRIM4-201ENST00000349062 TM2D1Q9BX74 207 aa11.9□□□□□ -0.51
TRIM4-201ENST00000349062 ASCL3Q9NQ33 180 aa11.9□□□□□ -0.51
TRIM4-201ENST00000349062 FBLN5Q9UBX5 448 aa11.9□□□□□ -0.51
TRIM4-201ENST00000349062 KCNIP3Q9Y2W7 256 aa11.9□□□□□ -0.51
TRIM4-201ENST00000349062 CNOT4O95628 575 aaKnown RBP11.89□□□□□ -0.51
TRIM4-201ENST00000349062 IFNA21P01568 189 aa11.89□□□□□ -0.51
TRIM4-201ENST00000349062 IZUMO4Q1ZYL8 232 aa11.89□□□□□ -0.51
TRIM4-201ENST00000349062 TBC1D28Q2M2D7 210 aa11.89□□□□□ -0.51
TRIM4-201ENST00000349062 NTNG2Q96CW9 530 aa11.89□□□□□ -0.51
TRIM4-201ENST00000349062 SEC11CQ9BY50 192 aa11.89□□□□□ -0.51
TRIM4-201ENST00000349062 LPAR3Q9UBY5 353 aa11.89□□□□□ -0.51
TRIM4-201ENST00000349062 UBE2J1Q9Y385 318 aaPredicted RBP11.89□□□□□ -0.51
TRIM4-201ENST00000349062 IFNA4P05014 189 aa11.89□□□□□ -0.51
TRIM4-201ENST00000349062 GNRHRP30968 328 aa11.89□□□□□ -0.51
TRIM4-201ENST00000349062 TGFBR3Q03167 851 aa11.89□□□□□ -0.51
TRIM4-201ENST00000349062 PDZD11Q5EBL8 140 aa11.89□□□□□ -0.51
TRIM4-201ENST00000349062 GGNBP1Q5YKI7 109 aa11.89□□□□□ -0.51
TRIM4-201ENST00000349062 PRDM14Q9GZV8 571 aa11.89□□□□□ -0.51
TRIM4-201ENST00000349062 SPACA1Q9HBV2 294 aa11.89□□□□□ -0.51
TRIM4-201ENST00000349062 RCC2Q9P258 522 aaKnown RBP11.89□□□□□ -0.51
TRIM4-201ENST00000349062 MRPS18CQ9Y3D5 142 aaKnown RBP11.89□□□□□ -0.51
TRIM4-201ENST00000349062 NXPH2O95156 264 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 TSPAN15O95858 294 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 OR8U9P0C7N5 309 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 OR13C7P0DN81 318 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 DHRS11Q6UWP2 260 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 OR8U1Q8NH10 309 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 KCNS2Q9ULS6 477 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 USF3Q68DE3 2245 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 PPP1CBP62140 327 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 OR2B11Q5JQS5 317 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 NANOS1Q8WY41 292 aaKnown RBP11.88□□□□□ -0.51
TRIM4-201ENST00000349062 KIRREL1Q96J84 757 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 SLC2A9Q9NRM0 540 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 FBXO7Q9Y3I1 522 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 PQLC2LA1A4F0 135 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 WNT9BO14905 357 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 ZZEF1O43149 2961 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 FAM53AQ6NSI3 398 aaPredicted RBP11.88□□□□□ -0.51
TRIM4-201ENST00000349062 Q6ZPA2 131 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 ZNF610Q8N9Z0 462 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 TAAR6Q96RI8 345 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 PFDN5Q99471 154 aa11.88□□□□□ -0.51
TRIM4-201ENST00000349062 RNF150Q9ULK6 438 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms