RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ARL4DP49703 201 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 GNB2P62879 340 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 ID3Q02535 119 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 ZNF92Q03936 586 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 ADIRFQ15847 76 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 HIST3H3Q16695 136 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 BSXQ3C1V8 233 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 KMT5CQ86Y97 462 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 C17orf78Q8N4C9 275 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 AGBL5Q8NDL9 886 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 OR11L1Q8NGX0 322 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 TMEM37Q8WXS4 190 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 ZCCHC14Q8WYQ9 949 aaKnown RBP8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 ANAPC16Q96DE5 110 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 TMEM56Q96MV1 263 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 REPIN1Q9BWE0 567 aaKnown RBP8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 OR2J1Q9GZK6 312 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 MAP1LC3BQ9GZQ8 125 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 TMEM222Q9H0R3 208 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 GAL3ST2Q9H3Q3 398 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 GPR35Q9HC97 309 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 PARD6AQ9NPB6 346 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 TMEM56-RWDD3S4R434 201 aa8.92□□□□□ -0.98
CHRNA1-202ENST00000348749 ITGB1BP1O14713 200 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 SIAH2O43255 324 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 CST7O76096 145 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 KBTBD11O94819 623 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 UMODP07911 640 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 SELEP16581 610 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 NPBWR2P48146 333 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 TNFSF10P50591 281 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 ZNF41P51814 821 aaPredicted RBP8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 RPL23P62829 140 aaKnown RBP8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 HYAL1Q12794 435 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 MEX3BQ6ZN04 569 aaKnown RBP8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 TEX43Q6ZNM6 134 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 TBX15Q96SF7 602 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 SMIM7Q9BQ49 75 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 PNRC2Q9NPJ4 139 aaKnown RBP8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 CHD7Q9P2D1 2997 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 VDAC3Q9Y277 283 aa8.91□□□□□ -0.98
CHRNA1-202ENST00000348749 SHISA7A6NL88 538 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 CEBPZOSA8MTT3 80 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 MPPED1O15442 326 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 LINC01565O15544 149 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 TLX3O43711 291 aaPredicted RBP8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 YPEL1O60688 119 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 TMEM50AO95807 157 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 IFNA5P01569 189 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 GLI4P10075 376 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 FCGR2AP12318 317 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 ANOS1P23352 680 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 EFNA3P52797 238 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 RRADP55042 308 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 UBE2NP61088 152 aaKnown RBP8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 RBX1P62877 108 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 LCN2P80188 198 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 ZNF154Q13106 437 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 ZNF726P1Q15940 193 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 COL5A1-AS1Q5SY13 56 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 ALKBH2Q6NS38 261 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 NUFIP2Q7Z417 695 aaKnown RBP8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 PLXDC1Q8IUK5 500 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 SUMF1Q8NBK3 374 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 NECAP1Q8NC96 275 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 OR2T10Q8NGZ9 312 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 OR1L3Q8NH93 324 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 LMX1AQ8TE12 382 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 OXGR1Q96P68 337 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 MS4A10Q96PG2 267 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 SIGLEC12Q96PQ1 595 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 YPEL2Q96QA6 119 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 PSMG3Q9BT73 122 aaPredicted RBP8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 OR51I2Q9H344 312 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 PRO3102Q9H379 93 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 RPRMQ9NS64 109 aa8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 KIAA0100Q14667 2235 aaKnown RBP8.9□□□□□ -0.98
CHRNA1-202ENST00000348749 ARID1AO14497 2285 aa8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 ZNF705FA8MVS1 300 aaPredicted RBP8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 LMO7DNF2Z398 122 aa8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 TRAF3IP2O43734 574 aaPredicted RBP8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 PIAS2O75928 621 aa8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 ZNF705DP0CH99 300 aaPredicted RBP8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 ZNF705BP0CI00 300 aaPredicted RBP8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 UCP1P25874 307 aa8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 OR5I1Q13606 314 aa8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 EXT1Q16394 746 aa8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 CXorf66Q5JRM2 361 aaPredicted RBP8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 FAM57BQ71RH2 274 aa8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 SELENOHQ8IZQ5 122 aaKnown RBP8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 TMEM217Q8N7C4 229 aa8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 BTF3L4Q96K17 158 aa8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 MSL2Q9HCI7 577 aa8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 AURKAIP1Q9NWT8 199 aaPredicted RBP8.9□□□□□ -0.99
CHRNA1-202ENST00000348749 IGLV3-12A0A075B6K2 115 aa8.89□□□□□ -0.99
CHRNA1-202ENST00000348749 A0A1W2PPQ1 181 aa8.89□□□□□ -0.99
CHRNA1-202ENST00000348749 TMEM250H0YL14 139 aa8.89□□□□□ -0.99
CHRNA1-202ENST00000348749 TCF21O43680 179 aa8.89□□□□□ -0.99
CHRNA1-202ENST00000348749 DHRS3O75911 302 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms