RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PPYP01298 95 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 LINC00614P0C842 121 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 CCL1P22362 96 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 OR10J1P30954 320 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 CNN1P51911 297 aaKnown RBP13.26□□□□□ -0.29
LMNA-201ENST00000347559 TMEM196Q5HYL7 178 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 KIR2DL5AQ8N109 375 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 OR13H1Q8NG92 308 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 OR2T10Q8NGZ9 312 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 FGF14Q92915 247 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 DDIT4LQ96D03 193 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 MRPL13Q9BYD1 178 aaKnown RBP13.26□□□□□ -0.29
LMNA-201ENST00000347559 COPS7AQ9UBW8 275 aa13.26□□□□□ -0.29
LMNA-201ENST00000347559 ADAMTS9Q9P2N4 1935 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 COL9A1P20849 921 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 RPL23P62829 140 aaKnown RBP13.25□□□□□ -0.29
LMNA-201ENST00000347559 EXT1Q16394 746 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 SELENOHQ8IZQ5 122 aaKnown RBP13.25□□□□□ -0.29
LMNA-201ENST00000347559 OIT3Q8WWZ8 545 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 ZNF442Q9H7R0 627 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 B3GAT1Q9P2W7 334 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 MAP1LC3B2A6NCE7 125 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 VSTM2BA6NLU5 285 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 NUPR1O60356 82 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 LCATP04180 440 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 BAXQ07812 192 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 GAGE1Q13065 139 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 MYPOPQ86VE0 399 aaPredicted RBP13.25□□□□□ -0.29
LMNA-201ENST00000347559 OR2AE1Q8NHA4 323 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 SPPL3Q8TCT6 385 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 MAP1LC3BQ9GZQ8 125 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 AURKAIP1Q9NWT8 199 aaPredicted RBP13.25□□□□□ -0.29
LMNA-201ENST00000347559 DOCK11Q5JSL3 2073 aa13.25□□□□□ -0.29
LMNA-201ENST00000347559 LIPT2A6NK58 231 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 HRASP01112 189 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 TNFP01375 233 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 CHRNA7P36544 502 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 PDLIM4P50479 330 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 DLX2Q07687 328 aaPredicted RBP13.24□□□□□ -0.29
LMNA-201ENST00000347559 ACOT6Q3I5F7 207 aaPredicted RBP13.24□□□□□ -0.29
LMNA-201ENST00000347559 OR2V1Q8NHB1 315 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 PYGO2Q9BRQ0 406 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 PLA2G2FQ9BZM2 168 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 SLC7A10Q9NS82 523 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 TRAV1-1A0A0B4J248 108 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 IGHV3-20A0A0C4DH32 117 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 HOXB2P14652 356 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 DTYMKP23919 212 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 BRS3P32247 399 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 IL24Q13007 206 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 SHHQ15465 462 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 DPPA3Q6W0C5 159 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 TGIF2LYQ8IUE0 185 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 LHX4Q969G2 390 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 RPP25Q9BUL9 199 aaKnown RBP13.24□□□□□ -0.29
LMNA-201ENST00000347559 COL4A2P08572 1712 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 GUCA1AP43080 201 aaPredicted RBP13.24□□□□□ -0.29
LMNA-201ENST00000347559 ENDOGQ14249 297 aaKnown RBP13.24□□□□□ -0.29
LMNA-201ENST00000347559 MRGPRGQ86SM5 289 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 NEK7Q8TDX7 302 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 KLHL13Q9P2N7 655 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 PPIAL4AQ9Y536 164 aa13.24□□□□□ -0.29
LMNA-201ENST00000347559 IFNA1P01562 189 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 IAPPP10997 89 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 GRB2P62993 217 aaKnown RBP13.23□□□□□ -0.29
LMNA-201ENST00000347559 SRPXP78539 464 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 ACTL10Q5JWF8 245 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 CYP2G1PQ6ZSU1 146 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 GAPTQ8N292 157 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 C11orf42Q8N5U0 333 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 PP6455Q8WZ26 134 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 SIGLEC12Q96PQ1 595 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 DNAJC4Q9NNZ3 241 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 ASCL3Q9NQ33 180 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 OR6C3Q9NZP0 311 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 TRAPPC6AO75865 159 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 POU2F2P09086 479 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 CD82P27701 267 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 EFNA3P52797 238 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 UCP3P55916 312 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 OR2J1Q9GZK6 312 aa13.23□□□□□ -0.29
LMNA-201ENST00000347559 KIR2DS5A0A0G2JLQ3 304 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 A0A0G2JNG1 304 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 ZNF814B7Z6K7 855 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 KIR2DS3K7RE56 304 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 MDH2P40926 338 aaKnown RBP13.22□□□□□ -0.29
LMNA-201ENST00000347559 PAX9P55771 341 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 GFERP55789 205 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 HIST1H3AP68431 136 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 ID3Q02535 119 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 KIR2DS5Q14953 304 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 ALKBH2Q6NS38 261 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 P2RX4Q99571 388 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 SLC39A9Q9NUM3 307 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 TMEM41BQ5BJD5 291 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 FAM78BQ5VT40 261 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 ZNF818PQ6ZRF7 136 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 OR4F5Q8NH21 305 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 PLPPR1Q8TBJ4 325 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 OR4F4Q96R69 305 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms