RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SLC35E4Q6ICL7 350 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 UNQ9370/PRO34162Q6UXP9 181 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 OR4C13Q8NGP0 309 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 C17orf50Q8WW18 174 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 CAPSLQ8WWF8 208 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 NPFFR1Q9GZQ6 430 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 PPIL3Q9H2H8 161 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 CALYQ9NYX4 217 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 DPM3Q9P2X0 92 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 AMMECR1Q9Y4X0 333 aaPredicted RBP12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 HILPDAQ9Y5L2 63 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 DSCAML1Q8TD84 2053 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 MAGEA13PA6NCF6 341 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A10PA6NDY2 464 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A18PA6NE21 464 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A16PA6NEW6 464 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A20PA6NIJ5 464 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A7PA6NKC0 464 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 VGLL3A8MV65 326 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A22PA8MWA6 464 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A12PA8MX19 464 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A5PA8MXJ8 464 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A23PA8MXZ1 464 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 LEUTXA8MZ59 168 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 PIN1P1O15428 100 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A15PP0C7V4 464 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A13PP0C7W8 464 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A14PP0C7W9 464 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A24PP0C7X0 464 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 MGMTP16455 207 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 SRMP19623 302 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 TPBGQ13641 420 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 PLA1AQ53H76 456 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 CCDC144NLQ6NUI1 221 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 SVOPQ8N4V2 548 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 OR10A7Q8NGE5 316 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 TMEM203Q969S6 136 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 MGLLQ99685 303 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 SELENOIQ9C0D9 397 aa12.78□□□□□ -0.36
TSPAN4-201ENST00000346501 KIAA2026Q5HYC2 2103 aa12.77□□□□□ -0.36
TSPAN4-201ENST00000346501 MRPS14O60783 128 aaKnown RBP12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 IL1AP01583 271 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 CD34P28906 385 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 GABRA5P31644 462 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 MNDAP41218 407 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 TBCEQ15813 527 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 RSBN1Q5VWQ0 802 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 C11orf88Q6PI97 169 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 BRICD5Q6PL45 260 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 ZNF367Q7RTV3 350 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 OR9G1Q8NH87 305 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 OR2T6Q8NHC8 308 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 LINC01006Q8NI28 216 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 MRGPRDQ8TDS7 321 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 SGCDQ92629 289 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 TAF15Q92804 592 aaKnown RBP eCLIP12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 AKR1E2Q96JD6 320 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 C16orf95Q9H693 158 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 RANBP3Q9H6Z4 567 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 ACOT13Q9NPJ3 140 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 IDI2-AS1Q9NZ38 188 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 TRAPPC2LQ9UL33 140 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 PEX16Q9Y5Y5 336 aa12.77□□□□□ -0.37
TSPAN4-201ENST00000346501 A0A1W2PP11 408 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 AIPO00170 330 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 CA11O75493 328 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 MMP23AO75900 390 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 TSPAN9O75954 239 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 GLAP06280 429 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 UCHL1P09936 223 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 CPEP16870 476 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 FUT3P21217 361 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 PSMD7P51665 324 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 DYNLT3P51808 116 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 GABARAPL2P60520 117 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 RELBQ01201 579 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 ARSJQ5FYB0 599 aaPredicted RBP12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 RAB12Q6IQ22 244 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 TRAT1Q6PIZ9 186 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 SLC16A12Q6ZSM3 486 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 Q6ZSV7 163 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 OR13A1Q8NGR1 328 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 KCNG3Q8TAE7 436 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 PLPPR1Q8TBJ4 325 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 KIRREL1Q96J84 757 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 NEDD4LQ96PU5 975 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 YTHDF1Q9BYJ9 559 aaKnown RBP12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 BANF2Q9H503 90 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 PLGRKTQ9HBL7 147 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 ETAA1Q9NY74 926 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 TCF19Q9Y242 345 aa12.76□□□□□ -0.37
TSPAN4-201ENST00000346501 A0A087X0M5 115 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 A0A1B0GX30 115 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 FAM172BPA6NC97 362 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 OOSP1A8MZH6 123 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 MPIG6BO95866 241 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 HTR2CP28335 458 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 INSL4Q14641 139 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 LTC4SQ16873 150 aa12.75□□□□□ -0.37
TSPAN4-201ENST00000346501 C17orf58Q2M2W7 97 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms