RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 LIPT2A6NK58 231 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 MT-ND6P03923 174 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 BOD1Q96IK1 185 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 TMEM56Q96MV1 263 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 HSPB8Q9UJY1 196 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 ITGBL1O95965 494 aaPredicted RBP15.86■□□□□ 0.13
SMC4-201ENST00000344722 SPINK9Q5DT21 86 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 MRPL54Q6P161 138 aaKnown RBP15.86■□□□□ 0.13
SMC4-201ENST00000344722 ANKRD33Q7Z3H0 272 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 APCDD1LQ8NCL9 501 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 OR10AD1Q8NGE0 317 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 PSG11Q9UQ72 335 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 STRCQ7RTU9 1775 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 GON4LQ3T8J9 2241 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 A0A1W2PPC4 97 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 CLEC3BP05452 202 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 CHRNB4P30926 498 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 ZXDAP98168 799 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 WDFY1Q8IWB7 410 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 NEURL1O76050 574 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 ZNF718Q3SXZ3 478 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 HELTA6NFD8 242 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 OR5B21A6NL26 309 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 CRYAAP02489 173 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 SP1P08047 785 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 MEF2BQ02080 365 aaPredicted RBP15.86■□□□□ 0.13
SMC4-201ENST00000344722 SOSTQ9BQB4 213 aa15.86■□□□□ 0.13
SMC4-201ENST00000344722 NUDT16L1Q9BRJ7 211 aaKnown RBP15.86■□□□□ 0.13
SMC4-201ENST00000344722 ASAH2BP0C7U1 165 aa15.85■□□□□ 0.13
SMC4-201ENST00000344722 ID4P47928 161 aa15.85■□□□□ 0.13
SMC4-201ENST00000344722 PMCHL1Q16048 86 aa15.85■□□□□ 0.13
SMC4-201ENST00000344722 SRD5A3Q9H8P0 318 aa15.85■□□□□ 0.13
SMC4-201ENST00000344722 OR2W1Q9Y3N9 320 aa15.85■□□□□ 0.13
SMC4-201ENST00000344722 CRYM-AS1A6NIL9 109 aa15.85■□□□□ 0.13
SMC4-201ENST00000344722 FAM87AP0C7U9 286 aa15.85■□□□□ 0.13
SMC4-201ENST00000344722 ROM1Q03395 351 aa15.85■□□□□ 0.13
SMC4-201ENST00000344722 TMEM204Q9BSN7 226 aa15.85■□□□□ 0.13
SMC4-201ENST00000344722 PPP1CCP36873 323 aaKnown RBP15.85■□□□□ 0.13
SMC4-201ENST00000344722 Q56UQ5 140 aa15.85■□□□□ 0.13
SMC4-201ENST00000344722 EGLN1Q9GZT9 426 aa15.85■□□□□ 0.13
SMC4-201ENST00000344722 LINC01387J3KSC0 135 aa15.85■□□□□ 0.13
SMC4-201ENST00000344722 TRGV10A0A0A0MS01 117 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 RPL36A-HNRNPH2H7BZ11 118 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 ZNF205O95201 554 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 ISG15P05161 165 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 MGAT2Q10469 447 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 MIA3Q5JRA6 1907 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 TNFSF14O43557 240 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 MOSPD3O75425 235 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 FCGR3AP08637 254 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 HOXA5P20719 270 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 HINT1P49773 126 aaPredicted RBP15.84■□□□□ 0.13
SMC4-201ENST00000344722 RAB7AP51149 207 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 Q1RN00 199 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 POC1AQ8NBT0 407 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 LRRC61Q9BV99 259 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 C5orf66Q9H5L9 145 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 TUBA4BQ9H853 241 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 A0A0G2JK05 382 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 PNLIPP16233 465 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 BTCP35070 178 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 UBE2L3P68036 154 aaKnown RBP15.84■□□□□ 0.13
SMC4-201ENST00000344722 SERGEFQ9UGK8 458 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 IFITM10A6NMD0 228 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 ISLRO14498 428 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 FZD5Q13467 585 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 PSG5Q15238 335 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 HIKESHIQ53FT3 197 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 D2HGDHQ8N465 521 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 OR4P4Q8NGL7 312 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 TXNDC17Q9BRA2 123 aa15.84■□□□□ 0.13
SMC4-201ENST00000344722 COL24A1Q17RW2 1714 aa15.83■□□□□ 0.13
SMC4-201ENST00000344722 MRGPRFQ96AM1 343 aa15.83■□□□□ 0.13
SMC4-201ENST00000344722 RNF24Q9Y225 148 aa15.83■□□□□ 0.13
SMC4-201ENST00000344722 EIF3IQ13347 325 aaKnown RBP15.83■□□□□ 0.12
SMC4-201ENST00000344722 SPATA46Q5T0L3 261 aa15.83■□□□□ 0.12
SMC4-201ENST00000344722 PTPRFP10586 1907 aa15.83■□□□□ 0.12
SMC4-201ENST00000344722 PMS2P1A4D2B8 440 aa15.83■□□□□ 0.12
SMC4-201ENST00000344722 HDHD3Q9BSH5 251 aaPredicted RBP15.83■□□□□ 0.12
SMC4-201ENST00000344722 MPC1Q9Y5U8 109 aa15.83■□□□□ 0.12
SMC4-201ENST00000344722 HES1Q14469 280 aa15.83■□□□□ 0.12
SMC4-201ENST00000344722 FBXO46Q6PJ61 603 aaPredicted RBP15.83■□□□□ 0.12
SMC4-201ENST00000344722 R3HDM4Q96D70 268 aa15.83■□□□□ 0.12
SMC4-201ENST00000344722 STAG3L2P0CL84 134 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 RNF224P0DH78 156 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 CTGFP29279 349 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 OR4A4PQ8NGN8 299 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 GPBAR1Q8TDU6 330 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 IP6K3Q96PC2 410 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 RHBDL1O75783 438 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 CA6P23280 308 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 CST9Q5W186 159 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 ZBTB34Q8NCN2 500 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 TMEM222Q9H0R3 208 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 AAMDCQ9H7C9 122 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 ZNF665Q9H7R5 613 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 FAM157CP0CG43 387 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 GPR3P46089 330 aa15.82■□□□□ 0.12
SMC4-201ENST00000344722 MARF1Q9Y4F3 1742 aaKnown RBP15.82■□□□□ 0.12
SMC4-201ENST00000344722 SMPD2O60906 423 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms