RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 PPP1R14AQ96A00 147 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 RPUSD4Q96CM3 377 aaKnown RBP7.07□□□□□ -1.28
ATG4A-201ENST00000343524 GMPPAQ96IJ6 420 aaPredicted RBP7.07□□□□□ -1.28
ATG4A-201ENST00000343524 SLC46A1Q96NT5 459 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 GPER1Q99527 375 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 ABHD14AQ9BUJ0 271 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TM2D1Q9BX74 207 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 PECRQ9BY49 303 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 TXNIPQ9H3M7 391 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 MANBALQ9NQG1 85 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 ANXA10Q9UJ72 324 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 MRPS16Q9Y3D3 137 aaKnown RBP7.07□□□□□ -1.28
ATG4A-201ENST00000343524 PXMP4Q9Y6I8 212 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 HEATR5BQ9P2D3 2071 aa7.07□□□□□ -1.28
ATG4A-201ENST00000343524 IGHV2OR16-5A0A0B4J2B6 119 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 FAM221AA4D161 298 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 FAM24AA6NFZ4 105 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 PRSS47A8MTI9 375 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 FOXI3A8MTJ6 420 aaPredicted RBP7.06□□□□□ -1.28
ATG4A-201ENST00000343524 C5orf67F2Z3F1 127 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 NDUFB8O95169 186 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 DBHP09172 617 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 GZMHP20718 246 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 WNT5AP41221 380 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 DYNLT3P51808 116 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 RPL15P61313 204 aaKnown RBP7.06□□□□□ -1.28
ATG4A-201ENST00000343524 RELBQ01201 579 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 MEF2BQ02080 365 aaPredicted RBP7.06□□□□□ -1.28
ATG4A-201ENST00000343524 MGAT2Q10469 447 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 NSDHLQ15738 373 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 DEFB134Q4QY38 66 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 CST9LP1Q5W188 147 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 MARCH3Q86UD3 253 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 LYG1Q8N1E2 194 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 SCGB1C1Q8TD33 95 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 RNF133Q8WVZ7 376 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 RELTQ969Z4 430 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 MSI2Q96DH6 328 aaKnown RBP7.06□□□□□ -1.28
ATG4A-201ENST00000343524 ADAT3Q96EY9 351 aaPredicted RBP7.06□□□□□ -1.28
ATG4A-201ENST00000343524 C1orf147Q96MC9 270 aaPredicted RBP7.06□□□□□ -1.28
ATG4A-201ENST00000343524 PBOV1Q9GZY1 135 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 SLC2A9Q9NRM0 540 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 FAM206AQ9NX38 181 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 SERGEFQ9UGK8 458 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 RPH3ALQ9UNE2 315 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 FANCMQ8IYD8 2048 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 MYO7AQ13402 2215 aa7.06□□□□□ -1.28
ATG4A-201ENST00000343524 LOC105371242A0A075B767 164 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 IGKV1D-16P01601 117 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 TTRP02766 147 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 UCP1P25874 307 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 BLVRBP30043 206 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-201ENST00000343524 PSMB3P49720 205 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 MRPS34P82930 218 aaKnown RBP7.05□□□□□ -1.28
ATG4A-201ENST00000343524 MLF2Q15773 248 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-201ENST00000343524 ACKR1Q16570 336 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 OGFOD3Q6PK18 319 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 Q6ZN92 141 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 TMPRSS7Q7RTY8 843 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 WDFY1Q8IWB7 410 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 TCEAL8Q8IYN2 117 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 TMEM171Q8WVE6 324 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 SLAMF6Q96DU3 332 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 TM4SF19Q96DZ7 209 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 VSTM2LQ96N03 204 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 ZNF665Q9H7R5 613 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 ZNF319Q9P2F9 582 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 NAV2Q8IVL1 2488 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 IGHV1-69-2A0A0G2JMI3 117 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-201ENST00000343524 BLACEA4D250 179 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 PHF1O43189 567 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-201ENST00000343524 SSSCA1O60232 199 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 LMX1BO60663 402 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 PIAS2O75928 621 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 IGHEP01854 428 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 CD55P08174 381 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 SELPP16109 830 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 AADACP22760 399 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 OR3A4PP47883 348 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 YPEL3P61236 119 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-201ENST00000343524 ID2Q02363 134 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 MMDQ15546 238 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 CD226Q15762 336 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 MSMO1Q15800 293 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 POM121L1PQ3SYA9 428 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 SPATA45Q537H7 98 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 OCIAD2Q56VL3 154 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.05□□□□□ -1.28
ATG4A-201ENST00000343524 KMT5CQ86Y97 462 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 C1orf174Q8IYL3 243 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 STPG4Q8N801 248 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 ZNF321PQ8N8H1 164 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 TOMM40LQ969M1 308 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 APH1AQ96BI3 265 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 PGAM5Q96HS1 289 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 SAMD10Q9BYL1 202 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 BANF2Q9H503 90 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 TUBG2Q9NRH3 451 aa7.05□□□□□ -1.28
ATG4A-201ENST00000343524 RBM7Q9Y580 266 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms