RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SUB1P53999 127 aaKnown RBP eCLIP7.07□□□□□ -1.28
UBE4B-202ENST00000343090 SLC38A11Q08AI6 406 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 FFAR4Q5NUL3 377 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 NR2C2APQ86WQ0 139 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 MRGPRDQ8TDS7 321 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 CLCF1Q9UBD9 225 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 C5orf52A6NGY3 159 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 TTRP02766 147 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 ZNF17P17021 662 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 DYNLT3P51808 116 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 RAC3P60763 192 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 GAB4Q2WGN9 574 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 WDR74Q6RFH5 385 aaPredicted RBP7.07□□□□□ -1.28
UBE4B-202ENST00000343090 MAFAQ8NHW3 353 aaPredicted RBP7.07□□□□□ -1.28
UBE4B-202ENST00000343090 M1APQ8TC57 530 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 OPN3Q9H1Y3 402 aaPredicted RBP7.07□□□□□ -1.28
UBE4B-202ENST00000343090 SLC25A22Q9H936 323 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 GPR27Q9NS67 375 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 ZMIZ1Q9ULJ6 1067 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 CACNA1IQ9P0X4 2223 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 MT-CO3P00414 261 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 OR10J1P30954 320 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 MAGEA5P43359 124 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 OR3A1P47881 315 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 TIGITQ495A1 244 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 LYZL2Q7Z4W2 148 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 C11orf42Q8N5U0 333 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 OR2M3Q8NG83 312 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 EDARADDQ8WWZ3 215 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 TINAGQ9UJW2 476 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 A0A1W2PPC1 479 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 SPINK4O60575 86 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 CTSDP07339 412 aaPredicted RBP7.07□□□□□ -1.28
UBE4B-202ENST00000343090 SPEM2Q0P670 501 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 TRA2AQ13595 282 aaKnown RBP eCLIP7.07□□□□□ -1.28
UBE4B-202ENST00000343090 SSPNQ14714 243 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 SLC36A1Q7Z2H8 476 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 KLHDC1Q8N7A1 406 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 SMRP1Q8NCR6 262 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 OR10AD1Q8NGE0 317 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 LYRM2Q9NU23 88 aaPredicted RBP7.07□□□□□ -1.28
UBE4B-202ENST00000343090 TMEM74BQ9NUR3 256 aa7.07□□□□□ -1.28
UBE4B-202ENST00000343090 TNS1Q9HBL0 1735 aaKnown RBP7.06□□□□□ -1.28
UBE4B-202ENST00000343090 TOX4O94842 621 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 PGA3P0DJD8 388 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 GPX4P36969 197 aaPredicted RBP7.06□□□□□ -1.28
UBE4B-202ENST00000343090 OR2Y1Q8NGV0 311 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 RAB24Q969Q5 203 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 RP1P56715 2156 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 SCN2AQ99250 2005 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 C3orf80F5H4A9 247 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 PIN1P1O15428 100 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 ZNF154Q13106 437 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 RNPS1Q15287 305 aaKnown RBP7.06□□□□□ -1.28
UBE4B-202ENST00000343090 CARFQ8N187 725 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 GAPTQ8N292 157 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 OR5B3Q8NH48 314 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 NTNG2Q96CW9 530 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 TCFL5Q9UL49 500 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 STARD10Q9Y365 291 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 MAP1LC3B2A6NCE7 125 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 CLEC3BP05452 202 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 PGA4P0DJD7 388 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 PGA5P0DJD9 388 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 HOXA5P20719 270 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 FCARP24071 287 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 PPP1CBP62140 327 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 LSM6P62312 80 aaKnown RBP7.06□□□□□ -1.28
UBE4B-202ENST00000343090 RPL11P62913 178 aaKnown RBP7.06□□□□□ -1.28
UBE4B-202ENST00000343090 ERHP84090 104 aaKnown RBP7.06□□□□□ -1.28
UBE4B-202ENST00000343090 MAP1LC3BQ9GZQ8 125 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 CCL28Q9NRJ3 127 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 FUT9Q9Y231 359 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 UNC13CQ8NB66 2214 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 TRAV14DV4A0A0A6YYC5 116 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 A0A0G2JK05 382 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 EPOPA6NHQ4 379 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 MMP16P51512 607 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 TAS2R45P59539 299 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 EFNB1P98172 346 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 IL13RA2Q14627 380 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 DMRTA1Q5VZB9 504 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 Q6ZN92 141 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 TBX15Q96SF7 602 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 MSL2Q9HCI7 577 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 SLC35D1Q9NTN3 355 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 PAM16Q9Y3D7 125 aa7.06□□□□□ -1.28
UBE4B-202ENST00000343090 TRGV10A0A0A0MS01 117 aa7.05□□□□□ -1.28
UBE4B-202ENST00000343090 CHST1O43916 411 aa7.05□□□□□ -1.28
UBE4B-202ENST00000343090 CD74P04233 296 aa7.05□□□□□ -1.28
UBE4B-202ENST00000343090 TRGC1P0CF51 173 aa7.05□□□□□ -1.28
UBE4B-202ENST00000343090 KLK2P20151 261 aa7.05□□□□□ -1.28
UBE4B-202ENST00000343090 KHDC3LQ587J8 217 aa7.05□□□□□ -1.28
UBE4B-202ENST00000343090 LYG1Q8N1E2 194 aa7.05□□□□□ -1.28
UBE4B-202ENST00000343090 ADAMTS17Q8TE56 1095 aa7.05□□□□□ -1.28
UBE4B-202ENST00000343090 LRRC29Q8WV35 223 aa7.05□□□□□ -1.28
UBE4B-202ENST00000343090 LRFN3Q9BTN0 628 aa7.05□□□□□ -1.28
UBE4B-202ENST00000343090 ZNF835Q9Y2P0 537 aa7.05□□□□□ -1.28
UBE4B-202ENST00000343090 THY1P04216 161 aa7.05□□□□□ -1.28
UBE4B-202ENST00000343090 TMEM241Q24JQ0 296 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms