RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 C1SP09871 688 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 ZNF688P0C7X2 276 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 SIX1Q15475 284 aaPredicted RBP15.7■□□□□ 0.1
SMAD4-201ENST00000342988 OVCH2Q7RTZ1 564 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 TXNRD2Q9NNW7 524 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 INSIG2Q9Y5U4 225 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 C5P01031 1676 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 ATAD5Q96QE3 1844 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 FRG2CA6NGY1 282 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 LINC00596Q86U02 117 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 ZNF707Q96C28 371 aaPredicted RBP15.7■□□□□ 0.1
SMAD4-201ENST00000342988 TSPOP30536 169 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 AWAT1Q58HT5 328 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 MRPL54Q6P161 138 aaKnown RBP15.7■□□□□ 0.1
SMAD4-201ENST00000342988 ANKRD33Q7Z3H0 272 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 SLC16A11Q8NCK7 471 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 OR4X1Q8NH49 305 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 DMRTA2Q96SC8 542 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 HS3ST2Q9Y278 367 aa15.7■□□□□ 0.1
SMAD4-201ENST00000342988 PCNX1Q96RV3 2341 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 SPRY1O43609 319 aaPredicted RBP15.69■□□□□ 0.1
SMAD4-201ENST00000342988 BEX4Q9NWD9 120 aaPredicted RBP15.69■□□□□ 0.1
SMAD4-201ENST00000342988 F11P03951 625 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 PRSS54Q6PEW0 395 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 MPC2O95563 127 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 TMEM255AQ5JRV8 349 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 CA13Q8N1Q1 262 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 TM4SF19Q96DZ7 209 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 TOX2Q96NM4 488 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 NPFFO15130 113 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 HLA-DRB1P01911 266 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 PRSS12P56730 875 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 KIR3DL3Q8N743 410 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 SLC25A19Q9HC21 320 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 A0A1B0GU03 582 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 KISS1Q15726 138 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 TMEM95Q3KNT9 176 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 METRNLQ641Q3 311 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 ZC3H3Q8IXZ2 948 aaKnown RBP15.69■□□□□ 0.1
SMAD4-201ENST00000342988 FREM1Q5H8C1 2179 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 IGKV3-7A0A075B6H7 116 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 IGKV6D-41A0A0C4DH26 115 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 TMEM210A6NLX4 147 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 FABP5Q01469 135 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 SLC25A34Q6PIV7 304 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 OR2V1Q8NHB1 315 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 FAM222BQ8WU58 562 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 CXXC4Q9H2H0 198 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 SLC17A3O00476 420 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 CLEC2LP0C7M8 214 aa15.69■□□□□ 0.1
SMAD4-201ENST00000342988 HLA-DQA1P01909 254 aa15.68■□□□□ 0.1
SMAD4-201ENST00000342988 DEFB109BQ30KR1 87 aa15.68■□□□□ 0.1
SMAD4-201ENST00000342988 SAMD13Q5VXD3 122 aa15.68■□□□□ 0.1
SMAD4-201ENST00000342988 BCDIN3DQ7Z5W3 292 aaKnown RBP15.68■□□□□ 0.1
SMAD4-201ENST00000342988 ZMIZ1Q9ULJ6 1067 aa15.68■□□□□ 0.1
SMAD4-201ENST00000342988 C19orf53Q9UNZ5 99 aaPredicted RBP15.68■□□□□ 0.1
SMAD4-201ENST00000342988 FUCA1P04066 466 aa15.68■□□□□ 0.1
SMAD4-201ENST00000342988 RTP2Q5QGT7 225 aa15.68■□□□□ 0.1
SMAD4-201ENST00000342988 ZAR1LA6NP61 321 aa15.68■□□□□ 0.1
SMAD4-201ENST00000342988 OR4A5Q8NH83 315 aa15.68■□□□□ 0.1
SMAD4-201ENST00000342988 GPR35Q9HC97 309 aa15.68■□□□□ 0.1
SMAD4-201ENST00000342988 ORAI1Q96D31 301 aa15.68■□□□□ 0.1
SMAD4-201ENST00000342988 NRIP2Q9BQI9 281 aa15.68■□□□□ 0.1
SMAD4-201ENST00000342988 KCNE5Q9UJ90 142 aa15.68■□□□□ 0.1
SMAD4-201ENST00000342988 GMPPAQ96IJ6 420 aaPredicted RBP15.68■□□□□ 0.1
SMAD4-201ENST00000342988 TMEM262E9PQX1 116 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 HMGN4O00479 90 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 CD27P26842 260 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 SAPCD1Q5SSQ6 148 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 VN1R2Q8NFZ6 395 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 AKR7A2O43488 359 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 LEPROTL1O95214 131 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 RNFT1Q5M7Z0 435 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 DNASE2BQ8WZ79 361 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 TMEM56-RWDD3S4R434 201 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 PLXNB2O15031 1838 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 IGHV3-15A0A0B4J1V0 119 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 OR8D4Q8NGM9 314 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 TRGV5A0A0B4J1U4 118 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 COX7A1P24310 79 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 R3HDM4Q96D70 268 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 HCFC1R1Q9NWW0 138 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 OPN4Q9UHM6 478 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 DEFB108AA8MXU0 73 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 ZNF83P51522 516 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 CDC14BO60729 498 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 ABLIM3O94929 683 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 MT-CO3P00414 261 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 TRGC1P0CF51 173 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 PPICP45877 212 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 GZMKP49863 264 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 CLN8Q9UBY8 286 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 HIST1H1DP16402 221 aaKnown RBP15.67■□□□□ 0.1
SMAD4-201ENST00000342988 PCP4P48539 62 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 DLEU7Q6UYE1 221 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 PRSS21Q9Y6M0 314 aa15.67■□□□□ 0.1
SMAD4-201ENST00000342988 GPX2P18283 190 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 LINC00303Q3SY05 128 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 SLC16A13Q7RTY0 426 aa15.66■□□□□ 0.1
SMAD4-201ENST00000342988 NPFFR1Q9GZQ6 430 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms