RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SCGB1C2P0DMR2 95 aa13.12□□□□□ -0.31
UBE3B-202ENST00000342494 HLA-GP17693 338 aa13.12□□□□□ -0.31
UBE3B-202ENST00000342494 ID1P41134 155 aa13.12□□□□□ -0.31
UBE3B-202ENST00000342494 MVDP53602 400 aa13.12□□□□□ -0.31
UBE3B-202ENST00000342494 SLC35B1P78383 322 aa13.12□□□□□ -0.31
UBE3B-202ENST00000342494 SHISA5Q8N114 240 aa13.12□□□□□ -0.31
UBE3B-202ENST00000342494 OR1L8Q8NGR8 309 aa13.12□□□□□ -0.31
UBE3B-202ENST00000342494 CTSSP25774 331 aa13.12□□□□□ -0.31
UBE3B-202ENST00000342494 LOXL3P58215 753 aa13.12□□□□□ -0.31
UBE3B-202ENST00000342494 KLHDC1Q8N7A1 406 aa13.12□□□□□ -0.31
UBE3B-202ENST00000342494 CHST5Q9GZS9 411 aa13.12□□□□□ -0.31
UBE3B-202ENST00000342494 VDAC1P21796 283 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 UCP2P55851 309 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 PRSS54Q6PEW0 395 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 OR4A4PQ8NGN8 299 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 ZNF714Q96N38 554 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 CCL13Q99616 98 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 SLIRPQ9GZT3 109 aaKnown RBP13.11□□□□□ -0.31
UBE3B-202ENST00000342494 ZNF831Q5JPB2 1677 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 SCN1AP35498 2009 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 BCORQ6W2J9 1755 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 KIAA1551Q9HCM1 1747 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 CROCCQ5TZA2 2017 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 A0A1W2PPE3 182 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 PRR19A6NJB7 356 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 ORM1P02763 201 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 ST3GAL2Q16842 350 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 TEX30Q5JUR7 227 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 INHBBP09529 407 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 G0S2P27469 103 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 ACAA2P42765 397 aaKnown RBP13.11□□□□□ -0.31
UBE3B-202ENST00000342494 FGF8P55075 233 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-202ENST00000342494 TMEM88Q6PEY1 159 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 SLC26A10Q8NG04 563 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 OR2W1Q9Y3N9 320 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 RREB1Q92766 1687 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 CLDN14O95500 239 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 GALR1P47211 349 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 NHLH1Q02575 133 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 NHLH2Q02577 135 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 ZNF273Q14593 569 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 ANGPTL4Q9BY76 406 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 HILPDAQ9Y5L2 63 aa13.11□□□□□ -0.31
UBE3B-202ENST00000342494 OR5AL1P0C617 328 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 SPNP16150 400 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 FAM78BQ5VT40 261 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 SLC25A42Q86VD7 318 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 NFAM1Q8NET5 270 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-202ENST00000342494 OR4X1Q8NH49 305 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 SSMEM1Q8WWF3 244 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 WDFY2Q96P53 400 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 GDF15Q99988 308 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 FBXL17Q9UF56 701 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 MED19A0JLT2 244 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-202ENST00000342494 FFAR1O14842 300 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 CAMPP49913 170 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 PIMREGQ9BSJ6 248 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 ANKRD20A5PA0PJZ0 165 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 CD40P25942 277 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 DYNLT3P51808 116 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 PSG5Q15238 335 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 RPEL1Q2QD12 228 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 ANKRD55Q3KP44 614 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 ZBTB34Q8NCN2 500 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 ZBTB44Q8NCP5 570 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 PERPQ96FX8 193 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 ZNF426Q9BUY5 554 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 TEX50A0A1B0GTY4 177 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 ADAP1O75689 374 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 RPS4Y2Q8TD47 263 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 FAM222BQ8WU58 562 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 OR2V2Q96R30 315 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 KIAA1324LA8MWY0 1029 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-202ENST00000342494 FAM27BQ5VT28 67 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 ZNF561Q8N587 486 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 WNT2BQ93097 391 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 RAB33BQ9H082 229 aa13.1□□□□□ -0.31
UBE3B-202ENST00000342494 OR4C45A6NMZ5 311 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 K7N7A8 449 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 CHST1O43916 411 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 G6PCP35575 357 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 ATP5J2P56134 94 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 OR4P4Q8NGL7 312 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 PARP11Q9NR21 331 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 MGAT2Q10469 447 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 NSUN5P2Q63ZY6 315 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 XAF1Q6GPH4 301 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 ZNF66Q6ZN08 573 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 ZNF519Q8TB69 540 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 LURAP1Q96LR2 239 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 ICE1Q9Y2F5 2266 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 RPL36A-HNRNPH2H7BZ11 118 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 HIST1H1EP10412 219 aaKnown RBP13.09□□□□□ -0.31
UBE3B-202ENST00000342494 C10orf113Q5VZT2 155 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 TMEM37Q8WXS4 190 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 MRGPRFQ96AM1 343 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 FCN1O00602 326 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 FAM106CPP0CH98 169 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 PPP1CCP36873 323 aaKnown RBP13.09□□□□□ -0.31
UBE3B-202ENST00000342494 MMP16P51512 607 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms