RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 PAPPAQ13219 1627 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 CLEC2AQ6UVW9 174 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 SLC25A42Q86VD7 318 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 ZBTB34Q8NCN2 500 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 OR10D4PQ8NGN7 298 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 FRRS1LQ9P0K9 344 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 CHST1O43916 411 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 CIDEAO60543 219 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 ACAA2P42765 397 aaKnown RBP13.36□□□□□ -0.27
COL11A2-201ENST00000341947 ERVS71-1P61550 626 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 SSMEM1Q8WWF3 244 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 UCN2Q96RP3 112 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 ZNF552Q9H707 407 aaPredicted RBP13.36□□□□□ -0.27
COL11A2-201ENST00000341947 RNF122Q9H9V4 155 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 CCL28Q9NRJ3 127 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 OGG1O15527 345 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 XAF1Q6GPH4 301 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 LSMEM1Q8N8F7 131 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 AUP1Q9Y679 476 aa13.36□□□□□ -0.27
COL11A2-201ENST00000341947 C5orf52A6NGY3 159 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 RNF224P0DH78 156 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 CLEC18BQ6UXF7 455 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 Q6ZN92 141 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 LIPGQ9Y5X9 500 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 SYNGR1O43759 233 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 SCGB1D4Q6XE38 83 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 OR1L8Q8NGR8 309 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 P2RX4Q99571 388 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 LAMA4Q16363 1823 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 TCRBV16S1A1N1A0A5B0 115 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 RHBDL1O75783 438 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 PPYP01298 95 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 BGLAPP02818 100 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 PPOXP50336 477 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 SLC35E4Q6ICL7 350 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 MFSD2BA6NFX1 497 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 ZNF207O43670 478 aaKnown RBP13.35□□□□□ -0.27
COL11A2-201ENST00000341947 OR10G8Q8NGN5 311 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 CA11O75493 328 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 APELAP0DMC3 54 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 ERVFRD-1P60508 538 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 SMAGPQ0VAQ4 97 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 GABRA6Q16445 453 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 OR2W1Q9Y3N9 320 aa13.35□□□□□ -0.27
COL11A2-201ENST00000341947 CTDSPLO15194 276 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 ADAP1O75689 374 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 LOXL3P58215 753 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 SNRNP40Q96DI7 357 aaKnown RBP13.34□□□□□ -0.27
COL11A2-201ENST00000341947 ZMAT5Q9UDW3 170 aaKnown RBP13.34□□□□□ -0.27
COL11A2-201ENST00000341947 ARID1BQ8NFD5 2236 aaPredicted RBP13.34□□□□□ -0.27
COL11A2-201ENST00000341947 DEDDO75618 318 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 MELTFP08582 738 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 TCL1AP56279 114 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 PNRC1Q12796 327 aaPredicted RBP13.34□□□□□ -0.27
COL11A2-201ENST00000341947 BSXQ3C1V8 233 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 TEX29Q8N6K0 151 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 FAM222BQ8WU58 562 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 VDAC1P21796 283 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 COL10A1Q03692 680 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 COX19Q49B96 90 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 C1orf174Q8IYL3 243 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 STXBP6Q8NFX7 210 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 DOCK1Q14185 1865 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 RPL36A-HNRNPH2H7BZ11 118 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 HOXD4P09016 255 aaPredicted RBP13.34□□□□□ -0.27
COL11A2-201ENST00000341947 CD1BP29016 333 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 FAM24BQ8N5W8 94 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 PRR13Q9NZ81 148 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 GLI3P10071 1580 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 C9orf172C9J069 976 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 HRKO00198 91 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 KIR3DL2P43630 455 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 TMEM191AQ9H0A3 160 aa13.34□□□□□ -0.27
COL11A2-201ENST00000341947 TAF1P21675 1872 aa13.33□□□□□ -0.27
COL11A2-201ENST00000341947 ISXQ2M1V0 245 aa13.33□□□□□ -0.27
COL11A2-201ENST00000341947 PIGYQ3MUY2 71 aa13.33□□□□□ -0.27
COL11A2-201ENST00000341947 COL13A1Q5TAT6 717 aaPredicted RBP13.33□□□□□ -0.27
COL11A2-201ENST00000341947 C16orf82Q7Z2V1 217 aa13.33□□□□□ -0.27
COL11A2-201ENST00000341947 MAP1LC3CQ9BXW4 147 aa13.33□□□□□ -0.27
COL11A2-201ENST00000341947 OR51B2Q9Y5P1 312 aa13.33□□□□□ -0.27
COL11A2-201ENST00000341947 B4E171 279 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 TSPAN7P41732 249 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 SULT1A1P50225 295 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 TEX30Q5JUR7 227 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 OR1L6Q8NGR2 347 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 WIPI2Q9Y4P8 454 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 TMPRSS3P57727 454 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 AESQ08117 197 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 KRTCAP3Q53RY4 240 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 C9orf40Q8IXQ3 194 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 FGF11Q92914 225 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 LPAR5Q9H1C0 372 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 TRAV34A0A0B4J273 112 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 SPINT1O43278 529 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 STPG1Q5TH74 334 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 IL22RA2Q969J5 263 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 STARD4Q96DR4 205 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 HMSDA8MTL9 139 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 ELOBQ15370 118 aa13.33□□□□□ -0.28
COL11A2-201ENST00000341947 HIGD1AQ9Y241 93 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms