RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 CLN8Q9UBY8 286 aa8.49□□□□□ -1.05
TPM3-207ENST00000341372 CUBNO60494 3623 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 IGHV3OR15-7A0A075B7D8 119 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 A6NIN4 97 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 AKR7A2O43488 359 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 GPX5O75715 221 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 HSMCR30P0CW71 290 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 MYL12AP19105 171 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 PAX8Q06710 450 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 CDK5R1Q15078 307 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 TMPRSS11AQ6ZMR5 421 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 SLC24A4Q8NFF2 622 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 ANGPTL6Q8NI99 470 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 DYNC2LI1Q8TCX1 351 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 SEH1LQ96EE3 360 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 BCL7BQ9BQE9 202 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 HES4Q9HCC6 221 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 RASL12Q9NYN1 266 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 ZNF222Q9UK12 451 aa8.48□□□□□ -1.05
TPM3-207ENST00000341372 IGKV1-9A0A0C4DH69 117 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 H3BSH0 61 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 CTDSPLO15194 276 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 PPIAL4GP0DN37 164 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 HAAOP46952 286 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 FUT6P51993 359 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 ERVK11-1P61568 191 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 NHLH2Q02577 135 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 RPL22L1Q6P5R6 122 aaKnown RBP8.47□□□□□ -1.05
TPM3-207ENST00000341372 ZNF788Q6ZQV5 615 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 ZNF676Q8N7Q3 588 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 RGP1Q92546 391 aaPredicted RBP8.47□□□□□ -1.05
TPM3-207ENST00000341372 NRIP2Q9BQI9 281 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 MND1Q9BWT6 205 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 COMMD4Q9H0A8 199 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 SLC7A11Q9UPY5 501 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 ERGIC3Q9Y282 383 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 POLDIP2Q9Y2S7 368 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 IGKV1-27A0A075B6S5 117 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 LOC105371242A0A075B767 164 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 KIR2DS1A0A191URI9 304 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 C13orf42A0A1B0GVH6 325 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 SYNGR1O43759 233 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 SERPINA3P01011 423 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 IFNA2P01563 188 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 IL6RP08887 468 aaPredicted RBP8.47□□□□□ -1.05
TPM3-207ENST00000341372 ATF1P18846 271 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 GLRA1P23415 457 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 WNT4P56705 351 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 MLLT11Q13015 90 aaPredicted RBP8.47□□□□□ -1.05
TPM3-207ENST00000341372 SLC36A1Q7Z2H8 476 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 CALHM1Q8IU99 346 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 PHC2Q8IXK0 858 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 PARP16Q8N5Y8 322 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 TMEM185AQ8NFB2 350 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 OR5AK2Q8NH90 309 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 TMEM170AQ8WVE7 144 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 SMIM19Q96E16 107 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 RBM14Q96PK6 669 aaKnown RBP8.47□□□□□ -1.05
TPM3-207ENST00000341372 PDCD1LG2Q9BQ51 273 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 BABAM2Q9NXR7 383 aa8.47□□□□□ -1.05
TPM3-207ENST00000341372 SIRT4Q9Y6E7 314 aaPredicted RBP8.47□□□□□ -1.05
TPM3-207ENST00000341372 A0A1B0GW55 424 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 CCRL2O00421 344 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 ENSAO43768 121 aaKnown RBP8.46□□□□□ -1.05
TPM3-207ENST00000341372 AIREO43918 545 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 PLA2G1BP04054 148 aaKnown RBP8.46□□□□□ -1.05
TPM3-207ENST00000341372 DUX4L2P0CJ85 424 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 DUX4L3P0CJ86 424 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 DUX4L4P0CJ87 422 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 DUX4L5P0CJ88 424 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 DUX4L6P0CJ89 424 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 DUX4L7P0CJ90 424 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 ZNF20P17024 532 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 SRP14P37108 136 aaKnown RBP8.46□□□□□ -1.05
TPM3-207ENST00000341372 TPBGQ13641 420 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 DMKNQ6E0U4 476 aaPredicted RBP8.46□□□□□ -1.05
TPM3-207ENST00000341372 DUX4L9Q6RFH8 374 aaPredicted RBP8.46□□□□□ -1.05
TPM3-207ENST00000341372 ACP7Q6ZNF0 438 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 FAM216BQ8N7L0 139 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 OR13C3Q8NGS6 347 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 TRMT10AQ8TBZ6 339 aaKnown RBP8.46□□□□□ -1.05
TPM3-207ENST00000341372 FGGYQ96C11 551 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 BORCS8Q96FH0 119 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 GAFA1Q96PS6 74 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 CCL13Q99616 98 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 DUX4Q9UBX2 424 aa8.46□□□□□ -1.05
TPM3-207ENST00000341372 ZMAT5Q9UDW3 170 aaKnown RBP8.46□□□□□ -1.05
TPM3-207ENST00000341372 IGKV1D-17A0A075B6S4 117 aa8.46□□□□□ -1.06
TPM3-207ENST00000341372 NKX6-3A6NJ46 265 aa8.46□□□□□ -1.06
TPM3-207ENST00000341372 OR2AT4A6NND4 320 aa8.46□□□□□ -1.06
TPM3-207ENST00000341372 DVL1O14640 695 aa8.46□□□□□ -1.06
TPM3-207ENST00000341372 SLC22A1O15245 554 aa8.46□□□□□ -1.06
TPM3-207ENST00000341372 SIGLEC5O15389 551 aa8.46□□□□□ -1.06
TPM3-207ENST00000341372 ECDO95905 644 aaPredicted RBP8.46□□□□□ -1.06
TPM3-207ENST00000341372 CHRM2P08172 466 aa8.46□□□□□ -1.06
TPM3-207ENST00000341372 PSG2P11465 335 aa8.46□□□□□ -1.06
TPM3-207ENST00000341372 VPREB1P12018 145 aa8.46□□□□□ -1.06
TPM3-207ENST00000341372 PRKACBP22694 351 aa8.46□□□□□ -1.06
TPM3-207ENST00000341372 SMIM21Q3B7S5 101 aa8.46□□□□□ -1.06
TPM3-207ENST00000341372 LIPKQ5VXJ0 399 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms