RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 SSX3Q99909 188 aa8.17□□□□□ -1.1
TRERF1-201ENST00000340840 SMIM7Q9BQ49 75 aa8.17□□□□□ -1.1
TRERF1-201ENST00000340840 EML5Q05BV3 1969 aa8.17□□□□□ -1.1
TRERF1-201ENST00000340840 A0A0J9YW62 118 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 C5orf63A6NC05 138 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 RPL36A-HNRNPH2H7BZ11 118 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 PTBP3O95758 552 aaKnown RBP8.16□□□□□ -1.1
TRERF1-201ENST00000340840 IGHV3-9P01782 118 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 OPN1MWP04001 364 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 OPN1MW2P0DN77 364 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 OPN1MW3P0DN78 364 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 CCL3P10147 92 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 PSMB3P49720 205 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 ELLP55199 621 aaPredicted RBP8.16□□□□□ -1.1
TRERF1-201ENST00000340840 CD81P60033 236 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 CFHR1Q03591 330 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 TRIP6Q15654 476 aaKnown RBP8.16□□□□□ -1.1
TRERF1-201ENST00000340840 MSMO1Q15800 293 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 GUSBP11Q6P575 273 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 HEPN1Q6WQI6 88 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 C1QL4Q86Z23 238 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 OR56B2PQ8NGI1 322 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 OR13D1Q8NGV5 346 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 PINX1Q96BK5 328 aaKnown RBP8.16□□□□□ -1.1
TRERF1-201ENST00000340840 MESP1Q9BRJ9 268 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 PSENENQ9NZ42 101 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 B4GALT7Q9UBV7 327 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 A0A087WWC5 75 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 A0A1B0GW64 132 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 ZNF729A6NN14 1252 aaPredicted RBP8.16□□□□□ -1.1
TRERF1-201ENST00000340840 ETV2O00321 342 aaPredicted RBP8.16□□□□□ -1.1
TRERF1-201ENST00000340840 SRP19P09132 144 aaKnown RBP8.16□□□□□ -1.1
TRERF1-201ENST00000340840 IAPPP10997 89 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 NCR3LG1Q68D85 454 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 FIP1L1Q6UN15 594 aaKnown RBP8.16□□□□□ -1.1
TRERF1-201ENST00000340840 BEND4Q6ZU67 534 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 RDH5Q92781 318 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 ABI3Q9P2A4 366 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 RNF212BA8MTL3 300 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 CLDN1O95832 211 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 SRYQ05066 204 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 RSPO4Q2I0M5 234 aaPredicted RBP8.16□□□□□ -1.1
TRERF1-201ENST00000340840 ZNF506Q5JVG8 444 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 H1FOOQ8IZA3 346 aaPredicted RBP8.16□□□□□ -1.1
TRERF1-201ENST00000340840 SLC25A45Q8N413 288 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 OR2V1Q8NHB1 315 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 LYPD6BQ8NI32 183 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 CCL28Q9NRJ3 127 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 KCNIP1Q9NZI2 227 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 OR14J1Q9UGF5 321 aa8.16□□□□□ -1.1
TRERF1-201ENST00000340840 OR5H1A6NKK0 313 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 ZNF732B4DXR9 585 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 TRGC2P03986 189 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 TMEM267Q0VDI3 215 aaPredicted RBP8.15□□□□□ -1.1
TRERF1-201ENST00000340840 SSX2Q16385 188 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 HIST3H3Q16695 136 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 SPANXN5Q5MJ07 72 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.15□□□□□ -1.1
TRERF1-201ENST00000340840 NINJ1Q92982 152 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 ZNF845Q96IR2 970 aaPredicted RBP8.15□□□□□ -1.1
TRERF1-201ENST00000340840 SPSB2Q99619 263 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 OR2H1Q9GZK4 316 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 HS3ST1O14792 307 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 RAC2P15153 192 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 GLIPR1P48060 266 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 TESK1Q15569 626 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 SELENOHQ8IZQ5 122 aaKnown RBP8.15□□□□□ -1.1
TRERF1-201ENST00000340840 FADS6Q8N9I5 356 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 OR5T1Q8NG75 326 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 MUCL1Q96DR8 90 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 POM121Q96HA1 1249 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 SEBOXQ9HB31 216 aaPredicted RBP8.15□□□□□ -1.1
TRERF1-201ENST00000340840 TRAPPC2LQ9UL33 140 aa8.15□□□□□ -1.1
TRERF1-201ENST00000340840 CYC1P08574 325 aa8.15□□□□□ -1.11
TRERF1-201ENST00000340840 SRD5A2P31213 254 aa8.15□□□□□ -1.11
TRERF1-201ENST00000340840 APLNRP35414 380 aa8.15□□□□□ -1.11
TRERF1-201ENST00000340840 GPM6AP51674 278 aa8.15□□□□□ -1.11
TRERF1-201ENST00000340840 ZNF92Q03936 586 aa8.15□□□□□ -1.11
TRERF1-201ENST00000340840 PRDX4Q13162 271 aa8.15□□□□□ -1.11
TRERF1-201ENST00000340840 MPV17LQ2QL34 196 aa8.15□□□□□ -1.11
TRERF1-201ENST00000340840 ZNF343Q6P1L6 599 aa8.15□□□□□ -1.11
TRERF1-201ENST00000340840 KCNIP4Q6PIL6 250 aa8.15□□□□□ -1.11
TRERF1-201ENST00000340840 OR4D5Q8NGN0 318 aa8.15□□□□□ -1.11
TRERF1-201ENST00000340840 LAMP3Q9UQV4 416 aa8.15□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A10PA6NDY2 464 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A18PA6NE21 464 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A16PA6NEW6 464 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A20PA6NIJ5 464 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A8PA6NJQ4 464 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A7PA6NKC0 464 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A22PA8MWA6 464 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A12PA8MX19 464 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A5PA8MXJ8 464 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A23PA8MXZ1 464 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 PHOX2AO14813 284 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 TIAF1O95411 115 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A15PP0C7V4 464 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A13PP0C7W8 464 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A14PP0C7W9 464 aa8.14□□□□□ -1.11
TRERF1-201ENST00000340840 FAM90A24PP0C7X0 464 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms