RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 PECRQ9BY49 303 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 GPR35Q9HC97 309 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 WDFY4Q6ZS81 3184 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 A0A1B0GUS0 222 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 SCDO00767 359 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 UTS2O95399 124 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 CER1O95813 267 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 ZNF823P16415 610 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 ECI1P42126 302 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 DCAF7P61962 342 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 FNDC7Q5VTL7 733 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 TIPARPQ7Z3E1 657 aaKnown RBP13.29□□□□□ -0.28
LIMK2-203ENST00000340552 IL22RA1Q8N6P7 574 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 OR4D5Q8NGN0 318 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 C20orf144Q9BQM9 153 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 PBOV1Q9GZY1 135 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 ZNF665Q9H7R5 613 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 SERINC1Q9NRX5 453 aa13.29□□□□□ -0.28
LIMK2-203ENST00000340552 CISD1Q9NZ45 108 aaKnown RBP13.29□□□□□ -0.28
LIMK2-203ENST00000340552 BCL2P10415 239 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 CD33P20138 364 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 BLVRBP30043 206 aaPredicted RBP13.28□□□□□ -0.28
LIMK2-203ENST00000340552 CHRNB4P30926 498 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 CEACAM8P31997 349 aaPredicted RBP13.28□□□□□ -0.28
LIMK2-203ENST00000340552 UCP3P55916 312 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 FMODQ06828 376 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 ADIRFQ15847 76 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 LGI3Q8N145 548 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 RTN4IP1Q8WWV3 396 aaPredicted RBP13.28□□□□□ -0.28
LIMK2-203ENST00000340552 EXTL1Q92935 676 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 MSL2Q9HCI7 577 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 DECR2Q9NUI1 292 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 MCTS1Q9ULC4 181 aaKnown RBP13.28□□□□□ -0.28
LIMK2-203ENST00000340552 FOXI3A8MTJ6 420 aaPredicted RBP13.28□□□□□ -0.28
LIMK2-203ENST00000340552 CCL25O15444 150 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 ZNF20P17024 532 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 FAM3BP58499 235 aaPredicted RBP13.28□□□□□ -0.28
LIMK2-203ENST00000340552 LPAL2Q16609 132 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 COL5A1-AS1Q5SY13 56 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 LIAT1Q6ZQX7 453 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 FAM89BQ8N5H3 189 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 OR51E1Q8TCB6 317 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 MS4A10Q96PG2 267 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 ZPBPQ9BS86 351 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 HDHD3Q9BSH5 251 aaPredicted RBP13.28□□□□□ -0.28
LIMK2-203ENST00000340552 B3GALT1Q9Y5Z6 326 aa13.28□□□□□ -0.28
LIMK2-203ENST00000340552 IGLV3-12A0A075B6K2 115 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 IGHV3-20A0A0C4DH32 117 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 NUPR1O60356 82 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 TNFSF13O75888 250 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 GALR1P47211 349 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 PHLDA2Q53GA4 152 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 TMEM256Q8N2U0 113 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 LRTM2Q8N967 370 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 SUMF1Q8NBK3 374 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 MSI2Q96DH6 328 aaKnown RBP13.27□□□□□ -0.28
LIMK2-203ENST00000340552 WWTR1Q9GZV5 400 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 HIPK2Q9H2X6 1198 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 TXNIPQ9H3M7 391 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 AURKAIP1Q9NWT8 199 aaPredicted RBP13.27□□□□□ -0.28
LIMK2-203ENST00000340552 B3GAT1Q9P2W7 334 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 PPIAL4AQ9Y536 164 aa13.27□□□□□ -0.28
LIMK2-203ENST00000340552 PROB1E7EW31 1015 aa13.27□□□□□ -0.29
LIMK2-203ENST00000340552 CST7O76096 145 aa13.27□□□□□ -0.29
LIMK2-203ENST00000340552 IL12BP29460 328 aa13.27□□□□□ -0.29
LIMK2-203ENST00000340552 DYNLT3P51808 116 aa13.27□□□□□ -0.29
LIMK2-203ENST00000340552 LEMD1Q68G75 181 aa13.27□□□□□ -0.29
LIMK2-203ENST00000340552 ODF3L1Q8IXM7 274 aa13.27□□□□□ -0.29
LIMK2-203ENST00000340552 OR5D18Q8NGL1 313 aa13.27□□□□□ -0.29
LIMK2-203ENST00000340552 OR5L1Q8NGL2 311 aa13.27□□□□□ -0.29
LIMK2-203ENST00000340552 OR10S1Q8NGN2 331 aa13.27□□□□□ -0.29
LIMK2-203ENST00000340552 OIT3Q8WWZ8 545 aa13.27□□□□□ -0.29
LIMK2-203ENST00000340552 ZCCHC14Q8WYQ9 949 aaKnown RBP13.27□□□□□ -0.29
LIMK2-203ENST00000340552 GPER1Q99527 375 aa13.27□□□□□ -0.29
LIMK2-203ENST00000340552 C17orf51A8MQB3 221 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 MSTNO14793 375 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 SELENOTP62341 195 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 SLC23A3Q6PIS1 610 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 TOMM20LQ6UXN7 152 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 C1QL2Q7Z5L3 287 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 TMEM252Q8N6L7 170 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 TMEM217Q8N7C4 229 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 GNPNAT1Q96EK6 184 aaPredicted RBP13.26□□□□□ -0.29
LIMK2-203ENST00000340552 OCIAD1Q9NX40 245 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 RRP8O43159 456 aaKnown RBP13.26□□□□□ -0.29
LIMK2-203ENST00000340552 CNN1P51911 297 aaKnown RBP13.26□□□□□ -0.29
LIMK2-203ENST00000340552 PLCXD2Q0VAA5 305 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 ACOT6Q3I5F7 207 aaPredicted RBP13.26□□□□□ -0.29
LIMK2-203ENST00000340552 RNF133Q8WVZ7 376 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 ALKBH3Q96Q83 286 aaPredicted RBP13.26□□□□□ -0.29
LIMK2-203ENST00000340552 SHANK1Q9Y566 2161 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 TRAV1-1A0A0B4J248 108 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 C20orf202A1L168 122 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 M0R296 226 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 HNF1AP20823 631 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 ENDOGQ14249 297 aaKnown RBP13.26□□□□□ -0.29
LIMK2-203ENST00000340552 RTP5Q14D33 572 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 SGCBQ16585 318 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 ABCA11PQ4W5N1 156 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 DEGS2Q6QHC5 323 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms