RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 OR2F1Q13607 317 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 ZNF345Q14585 488 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 SPIN3Q5JUX0 258 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 FAM185AQ8N0U4 392 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 SUMF2Q8NBJ7 301 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 SCCPDHQ8NBX0 429 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 PPP1R1CQ8WVI7 109 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 USB1Q9BQ65 265 aaKnown RBP12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 ARL6Q9H0F7 186 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 METTL8Q9H825 291 aaKnown RBP12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 TREM2Q9NZC2 230 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 GCN1Q92616 2671 aaKnown RBP12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 IGHV2OR16-5A0A0B4J2B6 119 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 TRDCB7Z8K6 153 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 F8VVB4 439 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 F8VWA3 439 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 DAZAP2Q15038 168 aaPredicted RBP12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 MOB1BQ7L9L4 216 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 LINC01560Q8TB33 94 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 SEC22AQ96IW7 307 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 MPC2O95563 127 aa12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 IFNA21P01568 189 aa12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 PGA5P0DJD9 388 aa12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 ZNF44P15621 663 aa12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 RPS2P15880 293 aaKnown RBP12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 IGFBP2P18065 325 aa12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 PSMB6P28072 239 aa12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 MPV17P39210 176 aa12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 EXOSC2Q13868 293 aaKnown RBP12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 SHEQ5VZ18 495 aa12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 INO80EQ8NBZ0 244 aaPredicted RBP12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 TOMM40LQ969M1 308 aa12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 SUCNR1Q9BXA5 334 aa12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 NAA60Q9H7X0 242 aa12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 ATP23Q9Y6H3 246 aa12.87□□□□□ -0.35
TUBB4B-201ENST00000340384 SH2D1BO14796 132 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 NXPH2O95156 264 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 NUP62P37198 522 aaPredicted RBP12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 PIGPP57054 158 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 FXYD4P59646 89 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 ERVK11-1P61568 191 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 NAAAQ02083 359 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 ZNF154Q13106 437 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 ANKRD55Q3KP44 614 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 RGS7BPQ6MZT1 257 aaPredicted RBP12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 ACOT7LQ6ZUV0 252 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 SLC51BQ86UW2 128 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 OR8H3Q8N146 312 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 POC1AQ8NBT0 407 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 OR5T2Q8NGG2 359 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 GALNT14Q96FL9 552 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 C2orf50Q96LR7 162 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 ZNF488Q96MN9 340 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 NRIP2Q9BQI9 281 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 RSRP1Q9BUV0 290 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 TNFSF18Q9UNG2 199 aa12.86□□□□□ -0.35
TUBB4B-201ENST00000340384 KANTRA0A1W2PQU2 76 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 RHBDL1O75783 438 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 CLDN1O95832 211 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 PPYP01298 95 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 CRYAAP02489 173 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 SRPXP78539 464 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 ZNF146Q15072 292 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 PAN3Q58A45 887 aaKnown RBP12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 SSX8Q7RTT4 187 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 WDR86Q86TI4 376 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 KCNRGQ8N5I3 272 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 ZNF565Q8N9K5 539 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 OR4A4PQ8NGN8 299 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 HS3ST6Q96QI5 342 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 IL36RNQ9UBH0 155 aa12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 FBXO9Q9UK97 447 aaPredicted RBP12.85□□□□□ -0.35
TUBB4B-201ENST00000340384 TRAV24A0A0B4J272 114 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 PIGBOS1A0A0B4J2F0 54 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 CDIPTO14735 213 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 HS3ST1O14792 307 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 GRPP07492 148 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 AADACP22760 399 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 DUSP1P28562 367 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 RPS23P62266 143 aaKnown RBP12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 UBA52P62987 128 aaKnown RBP12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 LRRC37A5PQ49AS3 106 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 CLLU1Q5K131 121 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 Q6P435 159 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 RTN4IP1Q8WWV3 396 aaPredicted RBP12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 RASL12Q9NYN1 266 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 RDH8Q9NYR8 311 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 PCDHB10Q9UN67 800 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 HSPB6O14558 160 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 SIAH2O43255 324 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 B3GALNT1O75752 331 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 S100GP29377 79 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 ZNF83P51522 516 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 HLA-DRB3P79483 266 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 ALKBH6Q3KRA9 238 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 ALKBH2Q6NS38 261 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 ZNF880Q6PDB4 577 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 MRPL30Q8TCC3 161 aaKnown RBP12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 RDH5Q92781 318 aa12.84□□□□□ -0.35
TUBB4B-201ENST00000340384 TLNRD1Q9H1K6 362 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms