RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 MELTFP08582 738 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 CD36P16671 472 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 RAB3BP20337 219 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 OMGP23515 440 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 CDK2P24941 298 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 GLP1RP43220 463 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 RPS27AP62979 156 aaKnown RBP12.42□□□□□ -0.42
UBE3B-201ENST00000340074 SLC9A3R2Q15599 337 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 C17orf58Q2M2W7 97 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 MIDNQ504T8 468 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 HES5Q5TA89 166 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 PRAMEF5Q5TYX0 476 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 ZNF565Q8N9K5 539 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 OR51D1Q8NGF3 324 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 OR13D1Q8NGV5 346 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 CYYR1Q96J86 154 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 C19orf24Q9BVV8 132 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 NCOR1P1Q9H4R4 102 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 VCX3AQ9NNX9 186 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 SESN1Q9Y6P5 492 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 TRAV39A0A0B4J263 110 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 SMIM30A4D0T7 59 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 ZNF729A6NN14 1252 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-201ENST00000340074 FBP1P09467 338 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 FUT3P21217 361 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 GADD45AP24522 165 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 GDNFP39905 211 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 RBM39Q14498 530 aaKnown RBP12.41□□□□□ -0.42
UBE3B-201ENST00000340074 BAIAP2L2Q6UXY1 529 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 HEPN1Q6WQI6 88 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 ZNF497Q6ZNH5 498 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 OR11H6Q8NGC7 330 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 MRGPRDQ8TDS7 321 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 FAM216AQ8WUB2 273 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 ZFAND2BQ8WV99 257 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 C17orf50Q8WW18 174 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 FAM3DQ96BQ1 224 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 AJUBAQ96IF1 538 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 CHCHD6Q9BRQ6 235 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 NICN1Q9BSH3 213 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 TMEM133Q9H2Q1 129 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 TNFRSF19Q9NS68 423 aa12.41□□□□□ -0.42
UBE3B-201ENST00000340074 LOC100506127A0A0U1RQW1 187 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 KBTBD11-OT1A0A1B0GTJ5 212 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 TMEM30CPA0ZSE6 113 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 TRIM64CA6NLI5 447 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 CLDN34H7C241 214 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 PAHP00439 452 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 ARG1P05089 322 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 CGB3P0DN86 165 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 CGB7P0DN87 165 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 C2orf76Q3KRA6 126 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 OR2W3Q7Z3T1 314 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 NR2C2APQ86WQ0 139 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.4□□□□□ -0.42
UBE3B-201ENST00000340074 CCDC107Q8WV48 283 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 TM2D1Q9BX74 207 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 CALYQ9NYX4 217 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 STEAP1Q9UHE8 339 aa12.4□□□□□ -0.42
UBE3B-201ENST00000340074 A0A0A6YYD4 124 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 IGHV2-26A0A0B4J1V2 119 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 UBE2QL1A1L167 161 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 FAM172BPA6NC97 362 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 IFITM5A6NNB3 132 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 ODF3BA8MYP8 253 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 PDCD6O75340 191 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 MT-ND4P03905 459 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 PAX6P26367 422 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 LGALS4P56470 323 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 DYNC1I2Q13409 638 aaKnown RBP12.39□□□□□ -0.43
UBE3B-201ENST00000340074 NKAPLQ5M9Q1 402 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 ZNF626Q68DY1 528 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 OR52W1Q6IF63 320 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 LHFPL4Q7Z7J7 247 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 LDLRAD3Q86YD5 345 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 DYRK2Q92630 601 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 KCTD7Q96MP8 289 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 CENPOQ9BU64 300 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 CLEC7AQ9BXN2 247 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 LPAR5Q9H1C0 372 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 RNF167Q9H6Y7 350 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 ZMAT3Q9HA38 289 aaKnown RBP12.39□□□□□ -0.43
UBE3B-201ENST00000340074 ETAA1Q9NY74 926 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 ZNRD1Q9P1U0 126 aa12.39□□□□□ -0.43
UBE3B-201ENST00000340074 TMEM272A0A1B0GTI8 110 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 H3BUI4 141 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 AIPO00170 330 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 IGHV4-59P01825 116 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 GLAP06280 429 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 RNASE1P07998 156 aaKnown RBP12.38□□□□□ -0.43
UBE3B-201ENST00000340074 JUNBP17275 347 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-201ENST00000340074 CFPP27918 469 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 CHATP28329 748 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 SSTR5P35346 364 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 RANBP1P43487 201 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 IER3P46695 156 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 C6orf201Q7Z4U5 140 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 BEND2Q8NDZ0 799 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 SSMEM1Q8WWF3 244 aa12.38□□□□□ -0.43
UBE3B-201ENST00000340074 KIRREL1Q96J84 757 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms