RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 TPRG1Q6ZUI0 275 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 PARS2Q7L3T8 475 aaKnown RBP8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 WDR34Q96EX3 536 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 RPRMQ9NS64 109 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 C9orf172C9J069 976 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 ZNF878C9JN71 531 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 P2RY10O00398 339 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 TOX4O94842 621 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 SMIM10L2AP0DMW4 78 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 SMIM10L2BP0DMW5 78 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 CRISP2P16562 243 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 AADACP22760 399 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 AMTP48728 403 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 SLC17A1Q14916 467 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 NSDHLQ15738 373 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 RAET1LQ5VY80 246 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 ABHD17CQ6PCB6 329 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 C17orf99Q6UX52 265 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 HAPLN4Q86UW8 402 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 OR2C3Q8N628 320 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 FAM222BQ8WU58 562 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 WDYHV1Q96HA8 205 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 HDHD3Q9BSH5 251 aaPredicted RBP8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 FNDC4Q9H6D8 234 aaPredicted RBP8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 CISD1Q9NZ45 108 aaKnown RBP8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 SMPXQ9UHP9 88 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 EMC9Q9Y3B6 208 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 EDDM13A0A1B0GTR0 161 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 LOC107986453A0A1B0GWG9 222 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 HAND1O96004 215 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 GYPAP02724 150 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 WNT2P09544 360 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 CD99P14209 185 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 KRTCAP3Q53RY4 240 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 CXorf66Q5JRM2 361 aaPredicted RBP8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 LHFPL1Q86WI0 220 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 OR2M7Q8NG81 312 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 RSPRY1Q96DX4 576 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 KTI12Q96EK9 354 aaPredicted RBP8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 GPHA2Q96T91 129 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 PECRQ9BY49 303 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 RTTNQ86VV8 2226 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 A0A0A6YYD5 115 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 A0A0B4J2E0 115 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 A0A1B0GX12 115 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 MBLAC1A4D2B0 266 aaPredicted RBP8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 C1QTNF9BB2RNN3 333 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 TLX3O43711 291 aaPredicted RBP8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 NUDT3O95989 172 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 CSNK2A2P19784 350 aaPredicted RBP8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 NTF3P20783 257 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 PIGPP57054 158 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 ARF6P62330 175 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 ZNF117Q03924 483 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 FAM53BQ14153 422 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 ZNF266Q14584 549 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 TRMT12Q53H54 448 aaKnown RBP8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 CYP2G1PQ6ZSU1 146 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 RTN4IP1Q8WWV3 396 aaPredicted RBP8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 RCHY1Q96PM5 261 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 PLK3Q9H4B4 646 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 MBNL1Q9NR56 388 aaKnown RBP8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 C3orf79P0CE67 100 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 ESDP10768 282 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 CPMP14384 443 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 IGFBP3P17936 291 aaPredicted RBP8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 MPLP40238 635 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 FUT6P51993 359 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 TMEM50BP56557 158 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 CTXN1P60606 82 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 ARG2P78540 354 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 TMEM267Q0VDI3 215 aaPredicted RBP8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 TCTN1Q2MV58 587 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 ITPRIPL2Q3MIP1 535 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 EIPR1Q53HC9 387 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 VAX1Q5SQQ9 334 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 VASH2Q86V25 355 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 ZIC4Q8N9L1 334 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 DTWD2Q8NBA8 298 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 OR1E3Q8WZA6 343 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 ZNF501Q96CX3 271 aaPredicted RBP8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 LIN37Q96GY3 246 aaPredicted RBP8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 HDAC8Q9BY41 377 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 FOXQ1Q9C009 403 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 THAP10Q9P2Z0 257 aaPredicted RBP8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 RHBDD3Q9Y3P4 386 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 SPEGQ15772 3267 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 COL6A3P12111 3177 aa8.35□□□□□ -1.07
PTCHD4-201ENST00000339488 SPINK4O60575 86 aa8.34□□□□□ -1.07
PTCHD4-201ENST00000339488 NPIPB7O75200 414 aa8.34□□□□□ -1.07
PTCHD4-201ENST00000339488 CLEC3AO75596 197 aa8.34□□□□□ -1.07
PTCHD4-201ENST00000339488 HBE1P02100 147 aa8.34□□□□□ -1.07
PTCHD4-201ENST00000339488 CYC1P08574 325 aa8.34□□□□□ -1.07
PTCHD4-201ENST00000339488 C1QTNF9P0C862 333 aa8.34□□□□□ -1.07
PTCHD4-201ENST00000339488 OTX1P32242 354 aaPredicted RBP8.34□□□□□ -1.07
PTCHD4-201ENST00000339488 PPP1CBP62140 327 aa8.34□□□□□ -1.07
PTCHD4-201ENST00000339488 PSG4Q00888 419 aa8.34□□□□□ -1.07
PTCHD4-201ENST00000339488 MLC1Q15049 377 aa8.34□□□□□ -1.07
PTCHD4-201ENST00000339488 PHYHD1Q5SRE7 291 aa8.34□□□□□ -1.07
PTCHD4-201ENST00000339488 C1orf140Q5VVS0 124 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms