RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 SPSB3Q6PJ21 355 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 WFDC8Q8IUA0 241 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 TCTEX1D1Q8N7M0 179 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 ABHD3Q8WU67 409 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 PSMF1Q92530 271 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 BORCS7Q96B45 105 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 SPIN2AQ99865 258 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 SPIN2BQ9BPZ2 258 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 CST9LQ9H4G1 147 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 LRRC3CA6NJW4 275 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 ZNF737O75373 536 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 GCH1P30793 250 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 OR14C36Q8NHC7 312 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 DAZLQ92904 295 aaKnown RBP8.1□□□□□ -1.11
RPGR-202ENST00000339363 CTHRC1Q96CG8 243 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 SCARF2Q96GP6 870 aaPredicted RBP8.1□□□□□ -1.11
RPGR-202ENST00000339363 C20orf144Q9BQM9 153 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 WNT10AQ9GZT5 417 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 RNF208Q9H0X6 261 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 PARLQ9H300 379 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 ZNF160Q9HCG1 818 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 SEPSECSQ9HD40 501 aaKnown RBP8.1□□□□□ -1.11
RPGR-202ENST00000339363 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.1□□□□□ -1.11
RPGR-202ENST00000339363 COA3Q9Y2R0 106 aaPredicted RBP8.1□□□□□ -1.11
RPGR-202ENST00000339363 H0YIG0 161 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 WDR1O75083 606 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 DBHP09172 617 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 OTX2P32243 289 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 RPS18P62269 152 aaKnown RBP8.1□□□□□ -1.11
RPGR-202ENST00000339363 HSF1Q00613 529 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 MRPL52Q86TS9 123 aaKnown RBP8.1□□□□□ -1.11
RPGR-202ENST00000339363 CISD2Q8N5K1 135 aaKnown RBP8.1□□□□□ -1.11
RPGR-202ENST00000339363 IFI44Q8TCB0 444 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 GPR35Q9HC97 309 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 BRWD1Q9NSI6 2320 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 LTBP2Q14767 1821 aa8.1□□□□□ -1.11
RPGR-202ENST00000339363 PSG1P11464 419 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 LMO1P25800 156 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 EFNA3P52797 238 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 UEVLDQ8IX04 471 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 FBXL14Q8N1E6 418 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 CCDC3Q9BQI4 270 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 PLSCR2Q9NRY7 297 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 SLC17A4Q9Y2C5 497 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 COX11Q9Y6N1 276 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 A0A1B0GW64 132 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 DUXBA0A1W2PPF3 345 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 HNRNPA2B1P22626 353 aaKnown RBP8.09□□□□□ -1.11
RPGR-202ENST00000339363 CDKN1AP38936 164 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 OR3A4PP47883 348 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 ZNF117Q03924 483 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 MRPL49Q13405 166 aaKnown RBP8.09□□□□□ -1.11
RPGR-202ENST00000339363 CHRDL2Q6WN34 429 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 TGIF2LYQ8IUE0 185 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 PRR22Q8IZ63 422 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 CLUHP3Q96NS8 147 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 SLC46A1Q96NT5 459 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 TSPAN32Q96QS1 320 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 HDAC8Q9BY41 377 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 CALHM2Q9HA72 323 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 TMEM242Q9NWH2 141 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 R4GMQ9 66 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 MAP1BP46821 2468 aaKnown RBP8.09□□□□□ -1.11
RPGR-202ENST00000339363 KIAA1324LA8MWY0 1029 aaPredicted RBP8.09□□□□□ -1.11
RPGR-202ENST00000339363 GNG7O60262 68 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 GOSR1O95249 250 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 CDS2O95674 445 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 CD46P15529 392 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 GZMHP20718 246 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 UCP2P55851 309 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 PAFAH1B2P68402 229 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 ZNF90Q03938 601 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 SHHQ15465 462 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 RSPO4Q2I0M5 234 aaPredicted RBP8.09□□□□□ -1.11
RPGR-202ENST00000339363 NIT1Q86X76 327 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 LRRC75AQ8NAA5 344 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 OR52N5Q8NH56 324 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 OR51E1Q8TCB6 317 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 RSG1Q9BU20 258 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 HSPB7Q9UBY9 170 aa8.09□□□□□ -1.11
RPGR-202ENST00000339363 ZNF816-ZNF321PA0A0X1KG74 233 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 RABIFP47224 123 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 FFAR4Q5NUL3 377 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 FAM90A2PQ658T7 463 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 FAM166AQ6J272 317 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 KMT5CQ86Y97 462 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 TMEM252Q8N6L7 170 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 CCDC71LQ8N9Z2 235 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 ZNF439Q8NDP4 499 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 OR51G1Q8NGK1 321 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 RERGQ96A58 199 aaPredicted RBP8.08□□□□□ -1.12
RPGR-202ENST00000339363 NAA60Q9H7X0 242 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 WASHC3Q9Y3C0 194 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 MDFIC2A0A1B0GVS7 189 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 IL11P20809 199 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 COL9A1P20849 921 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 HTD2P86397 168 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 TCF23Q7RTU1 214 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 CA13Q8N1Q1 262 aa8.08□□□□□ -1.12
RPGR-202ENST00000339363 PTX4Q96A99 478 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms