RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 NCCRP1Q6ZVX7 275 aaPredicted RBP13.71□□□□□ -0.22
HPS1-202ENST00000338546 WFDC8Q8IUA0 241 aa13.71□□□□□ -0.22
HPS1-202ENST00000338546 SUCNR1Q9BXA5 334 aa13.71□□□□□ -0.22
HPS1-202ENST00000338546 MRPL37Q9BZE1 423 aaKnown RBP13.71□□□□□ -0.22
HPS1-202ENST00000338546 NAA60Q9H7X0 242 aa13.71□□□□□ -0.22
HPS1-202ENST00000338546 IL19Q9UHD0 177 aa13.71□□□□□ -0.22
HPS1-202ENST00000338546 BOD1L1Q8NFC6 3051 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 hCG_1807616A0A1W2PRN6 198 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 TMEM30CPA0ZSE6 113 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 ZNF81P51508 661 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 SNRPD2P62316 118 aaKnown RBP13.7□□□□□ -0.22
HPS1-202ENST00000338546 HERPUD1Q15011 391 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 SLC9A3R2Q15599 337 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 ANKRD55Q3KP44 614 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 LRTM2Q8N967 370 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 LRRC29Q8WV35 223 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 RTN4IP1Q8WWV3 396 aaPredicted RBP13.7□□□□□ -0.22
HPS1-202ENST00000338546 TOMM40LQ969M1 308 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 LRRC46Q96FV0 321 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 OR2V2Q96R30 315 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 SLC2A9Q9NRM0 540 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 UFSP2Q9NUQ7 469 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 SHANK1Q9Y566 2161 aa13.7□□□□□ -0.22
HPS1-202ENST00000338546 CADP27708 2225 aa13.69□□□□□ -0.22
HPS1-202ENST00000338546 ABCD4O14678 606 aa13.69□□□□□ -0.22
HPS1-202ENST00000338546 LHBP01229 141 aa13.69□□□□□ -0.22
HPS1-202ENST00000338546 RPA2P15927 270 aa13.69□□□□□ -0.22
HPS1-202ENST00000338546 SERPINF1P36955 418 aa13.69□□□□□ -0.22
HPS1-202ENST00000338546 FXYD4P59646 89 aa13.69□□□□□ -0.22
HPS1-202ENST00000338546 VHLLQ6RSH7 139 aa13.69□□□□□ -0.22
HPS1-202ENST00000338546 PCSK4Q6UW60 755 aa13.69□□□□□ -0.22
HPS1-202ENST00000338546 OR5T2Q8NGG2 359 aa13.69□□□□□ -0.22
HPS1-202ENST00000338546 OR10J5Q8NHC4 309 aa13.69□□□□□ -0.22
HPS1-202ENST00000338546 PLPPR1Q8TBJ4 325 aa13.69□□□□□ -0.22
HPS1-202ENST00000338546 WDR89Q96FK6 387 aaPredicted RBP13.69□□□□□ -0.22
HPS1-202ENST00000338546 ESRP2Q9H6T0 727 aaKnown RBP13.69□□□□□ -0.22
HPS1-202ENST00000338546 PIGBOS1A0A0B4J2F0 54 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 IGKV1-6A0A0C4DH72 117 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 C5orf51A6NDU8 294 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 L7N2F9 121 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 M0R233 179 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 WNT9BO14905 357 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 SORDQ00796 357 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 BSPH1Q075Z2 132 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 HMGN3Q15651 99 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 LDLRAD3Q86YD5 345 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 H1FOOQ8IZA3 346 aaPredicted RBP13.68□□□□□ -0.22
HPS1-202ENST00000338546 ZNF565Q8N9K5 539 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 KDF1Q8NAX2 398 aaPredicted RBP13.68□□□□□ -0.22
HPS1-202ENST00000338546 PPP1R35Q8TAP8 253 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 Q8TCH9 128 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 RNASE6Q93091 150 aaKnown RBP13.68□□□□□ -0.22
HPS1-202ENST00000338546 KIRREL1Q96J84 757 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 WFIKKN1Q96NZ8 548 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 KCNIP1Q9NZI2 227 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 COQ3Q9NZJ6 369 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 OR14J1Q9UGF5 321 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 TRAPPC2LQ9UL33 140 aa13.68□□□□□ -0.22
HPS1-202ENST00000338546 TRAV14DV4A0A0A6YYC5 116 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 IGHV3-64DA0A0J9YX35 117 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 GPR31O00270 319 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 CCL21O00585 134 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 BET1O15155 118 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 B3GALNT1O75752 331 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 CD55P08174 381 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 RCC1P18754 421 aaPredicted RBP13.67□□□□□ -0.22
HPS1-202ENST00000338546 SRPXP78539 464 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 C11orf87Q6NUJ2 197 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 TRAT1Q6PIZ9 186 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 PPP1R1CQ8WVI7 109 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 C2orf50Q96LR7 162 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 HEXA-AS1Q9H8Q6 139 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 OR2W1Q9Y3N9 320 aa13.67□□□□□ -0.22
HPS1-202ENST00000338546 FAM25EA8MYX2 175 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 CCSO14618 274 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 SPRY3O43610 288 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 PSPNO60542 156 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 IFNA21P01568 189 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 IGHV1-46P01743 117 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 WNT2P09544 360 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 CXCL2P19875 107 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 PSMB6P28072 239 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 S100GP29377 79 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 GNRHRP30968 328 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 PRDX2P32119 198 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 TMEM187Q14656 261 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 NCMAPQ5T1S8 102 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 LILRB4Q8NHJ6 448 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 THAP6Q8TBB0 222 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 SEC22AQ96IW7 307 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 NCOR1P1Q9H4R4 102 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 METTL8Q9H825 291 aaKnown RBP13.66□□□□□ -0.22
HPS1-202ENST00000338546 NDRG3Q9UGV2 375 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 ATMQ13315 3056 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 SPTA1P02549 2419 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 FXYD6-FXYD2A0A087WZ82 144 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 A0A0D9SG52 128 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 C13orf42A0A1B0GVH6 325 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 OOEPA6NGQ2 149 aa13.66□□□□□ -0.22
HPS1-202ENST00000338546 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms