RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 FAM90A5PA8MXJ8 464 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A23PA8MXZ1 464 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A15PP0C7V4 464 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A13PP0C7W8 464 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A14PP0C7W9 464 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM90A24PP0C7X0 464 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 KITLGP21583 273 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 LPAR6P43657 344 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 BHLHA15Q7RTS1 189 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-202ENST00000338368 IGHV3-43A0A0B4J1X8 118 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 IGHV3-43DP0DP04 118 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 COX5BP10606 129 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 S1PR3Q99500 378 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 ARV1Q9H2C2 271 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 DEFB108AA8MXU0 73 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 PRR33A8MZF0 331 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 ERGIC1Q969X5 290 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 CFDP00746 253 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-202ENST00000338368 NPBWR2P48146 333 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 PHYHD1Q5SRE7 291 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 HSD17B13Q7Z5P4 300 aaPredicted RBP5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM122AQ96E09 287 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 OR2W1Q9Y3N9 320 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 ACKR3P25106 362 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 ALDH3B1P43353 468 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 PLAC9Q5JTB6 97 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 RPUSD3Q6P087 351 aaKnown RBP5.45□□□□□ -1.54
PRKDC-202ENST00000338368 TBC1D26Q86UD7 250 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 FAM219AQ8IW50 185 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 DEPPQ9NTK1 212 aa5.45□□□□□ -1.54
PRKDC-202ENST00000338368 MRPS18CQ9Y3D5 142 aaKnown RBP5.45□□□□□ -1.54
PRKDC-202ENST00000338368 KLF3P57682 345 aaPredicted RBP5.44□□□□□ -1.54
PRKDC-202ENST00000338368 FAM122CQ6P4D5 195 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 LYPD8Q6UX82 237 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 CISD2Q8N5K1 135 aaKnown RBP5.44□□□□□ -1.54
PRKDC-202ENST00000338368 BORCS7Q96B45 105 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 TAAR6Q96RI8 345 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 KCNIP2Q9NS61 270 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 TRDCB7Z8K6 153 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 VDAC1P21796 283 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 BTCP35070 178 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 TNFAIP6P98066 277 aaPredicted RBP5.44□□□□□ -1.54
PRKDC-202ENST00000338368 ZIC4Q8N9L1 334 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 OR1K1Q8NGR3 316 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 Q96M66 194 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 OR8U8P0C7N1 319 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 CIB3Q96Q77 187 aaPredicted RBP5.44□□□□□ -1.54
PRKDC-202ENST00000338368 PRDM14Q9GZV8 571 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 PSG11Q9UQ72 335 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 CLEC18AA5D8T8 446 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 M0R1X1 148 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 GZMHP20718 246 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 ELLP55199 621 aaPredicted RBP5.44□□□□□ -1.54
PRKDC-202ENST00000338368 CLEC18CQ8NCF0 446 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 LFNGQ8NES3 379 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 AKR1E2Q96JD6 320 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 FN3KRPQ9HA64 309 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 UMAD1C9J7I0 102 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 SYNGR2O43760 224 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 OR2A4O95047 310 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 PMELP40967 661 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 IGSF11Q5DX21 431 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 SLC36A1Q7Z2H8 476 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 PAQR4Q8N4S7 273 aaPredicted RBP5.44□□□□□ -1.54
PRKDC-202ENST00000338368 BMPERQ8N8U9 685 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 OR10S1Q8NGN2 331 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 OR10Z1Q8NGY1 313 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 OR2A7Q96R45 310 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 OR2D2Q9H210 308 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 PPP1R14DQ9NXH3 145 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 SLC2A8Q9NY64 477 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 SYNGR1O43759 233 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 PTGDSP41222 190 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 ADAM5Q6NVV9 412 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 TMEM65Q6PI78 240 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 TRAT1Q6PIZ9 186 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 OR5C1Q8NGR4 320 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 SHARPINQ9H0F6 387 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 PURGQ9UJV8 347 aaKnown RBP5.44□□□□□ -1.54
PRKDC-202ENST00000338368 SDK2Q58EX2 2172 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 CRYBA1P05813 215 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF250P15622 560 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 FOXO1Q12778 655 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 CST9LP1Q5W188 147 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 FDCSPQ8NFU4 85 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 NDUFB3O43676 98 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 CDS2O95674 445 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF708P17019 499 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 RAB13P51153 203 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 SMIM15Q7Z3B0 74 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 LHX4Q969G2 390 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 ADGRG7Q96K78 797 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 CHST1O43916 411 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 NMBP08949 121 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 P2RY1P47900 373 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 HPSE2Q8WWQ2 592 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 PINX1Q96BK5 328 aaKnown RBP5.44□□□□□ -1.54
PRKDC-202ENST00000338368 TXN2Q99757 166 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 LINC00470Q9BZP3 86 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 SMCO4Q9NRQ5 59 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms