RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 MED9Q9NWA0 146 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 NPTNQ9Y639 398 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 C3orf85A0A1B0GTC6 90 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 SHISA7A6NL88 538 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 ZNF705GA8MUZ8 300 aaPredicted RBP7.13□□□□□ -1.27
HPS4-201ENST00000336873 E5RGE8 158 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 PROB1E7EW31 1015 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 TIMM8AO60220 97 aaPredicted RBP7.13□□□□□ -1.27
HPS4-201ENST00000336873 OR2C1O95371 312 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 CD1AP06126 327 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 FGF2P09038 288 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 MMP9P14780 707 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 MPLP40238 635 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 SSBP1Q04837 148 aaKnown RBP7.13□□□□□ -1.27
HPS4-201ENST00000336873 SLC10A1Q14973 349 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 C1orf210Q8IVY1 113 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 ZDHHC23Q8IYP9 409 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 TMEM204Q9BSN7 226 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 MRPL13Q9BYD1 178 aaKnown RBP7.13□□□□□ -1.27
HPS4-201ENST00000336873 ALX4Q9H161 411 aaPredicted RBP7.13□□□□□ -1.27
HPS4-201ENST00000336873 NAA60Q9H7X0 242 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 SLC2A8Q9NY64 477 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 NDRG3Q9UGV2 375 aa7.13□□□□□ -1.27
HPS4-201ENST00000336873 TNCP24821 2201 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 IGHV1-45A0A0A0MS14 117 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 PDCD6O75340 191 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 UMODP07911 640 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 FCGR3AP08637 254 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 FSTP19883 344 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 ERVS71-1P61550 626 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 SPEM2Q0P670 501 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 EIF2S3LQ2VIR3 472 aaKnown RBP7.12□□□□□ -1.27
HPS4-201ENST00000336873 WDR5BQ86VZ2 330 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 MRGPRFQ96AM1 343 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 HS3ST6Q96QI5 342 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 RSG1Q9BU20 258 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 OR2H1Q9GZK4 316 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 SHARPINQ9H0F6 387 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 ZNF552Q9H707 407 aaPredicted RBP7.12□□□□□ -1.27
HPS4-201ENST00000336873 SMCO4Q9NRQ5 59 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 KCNIP1Q9NZI2 227 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 PRSS50Q9UI38 385 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 A0A1W2PPE3 182 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 MFNGO00587 321 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 RAC2P15153 192 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 FUT6P51993 359 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 RHEBQ15382 184 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 DHRS11Q6UWP2 260 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 OVCH2Q7RTZ1 564 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 OR2C3Q8N628 320 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 DMBX1Q8NFW5 382 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 OR1J1Q8NGS3 322 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 TP53RKQ96S44 253 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 C19orf12Q9NSK7 152 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 TMEM38BQ9NVV0 291 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 CACNG5Q9UF02 275 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 C7orf77A4D0Y5 90 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 PINLYPA6NC86 204 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 OR6C6A6NF89 314 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 TSTD3H0UI37 97 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 NDUFA2O43678 99 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 CST4P01036 141 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 SFTPCP11686 197 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 COX6A1P12074 109 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 DEFA4P12838 97 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 ZNF708P17019 499 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 DYNLT3P51808 116 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 SUPT4H1P63272 117 aaKnown RBP7.12□□□□□ -1.27
HPS4-201ENST00000336873 BAXQ07812 192 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 IL11RAQ14626 422 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 RAB35Q15286 201 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 LHFPL2Q6ZUX7 228 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 HPSE2Q8WWQ2 592 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 DNASE2BQ8WZ79 361 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 SPIN2AQ99865 258 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 SPIN2BQ9BPZ2 258 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 NRIP2Q9BQI9 281 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 GPR35Q9HC97 309 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 GCM1Q9NP62 436 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 DEPPQ9NTK1 212 aa7.12□□□□□ -1.27
HPS4-201ENST00000336873 RCC2Q9P258 522 aaKnown RBP7.12□□□□□ -1.27
HPS4-201ENST00000336873 ACACBO00763 2458 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 OTOGLQ3ZCN5 2332 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 UBE2L5PA0A1B0GUS4 154 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 CYB5BO43169 146 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 RHBDL1O75783 438 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 CD74P04233 296 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 CEACAM6P40199 344 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 MRPL49Q13405 166 aaKnown RBP7.11□□□□□ -1.27
HPS4-201ENST00000336873 PNLIPRP3Q17RR3 467 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 HES3Q5TGS1 186 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 DTX1Q86Y01 620 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 MRGPRDQ8TDS7 321 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 POM121Q96HA1 1249 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 OR2J1Q9GZK6 312 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 GAB2Q9UQC2 676 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 YLPM1P49750 1951 aaKnown RBP7.11□□□□□ -1.27
HPS4-201ENST00000336873 ANKRD11Q6UB99 2663 aaPredicted RBP7.11□□□□□ -1.27
HPS4-201ENST00000336873 IFNA10P01566 189 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 HKR1P10072 659 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms