RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 TMEM88Q6PEY1 159 aa12.19□□□□□ -0.46
LIPA-202ENST00000336233 CBLN2Q8IUK8 224 aa12.19□□□□□ -0.46
LIPA-202ENST00000336233 SELENOHQ8IZQ5 122 aaKnown RBP12.19□□□□□ -0.46
LIPA-202ENST00000336233 OR8U1Q8NH10 309 aa12.19□□□□□ -0.46
LIPA-202ENST00000336233 IL22RA2Q969J5 263 aa12.19□□□□□ -0.46
LIPA-202ENST00000336233 KIRREL1Q96J84 757 aa12.19□□□□□ -0.46
LIPA-202ENST00000336233 LUZP4Q9P127 313 aa12.19□□□□□ -0.46
LIPA-202ENST00000336233 SLC22A20A6NK97 555 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 NGFP01138 241 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 SP9P0CG40 484 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 UCP1P25874 307 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 MEOX1P50221 254 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 GNMTQ14749 295 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 ZNF880Q6PDB4 577 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 RBMS3Q6XE24 437 aaKnown RBP12.18□□□□□ -0.46
LIPA-202ENST00000336233 NUFIP2Q7Z417 695 aaKnown RBP12.18□□□□□ -0.46
LIPA-202ENST00000336233 DEFB123Q8N688 67 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 KDF1Q8NAX2 398 aaPredicted RBP12.18□□□□□ -0.46
LIPA-202ENST00000336233 WNT2BQ93097 391 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 HIST1H2AAQ96QV6 131 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 PKIBQ9C010 78 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 ZNF552Q9H707 407 aaPredicted RBP12.18□□□□□ -0.46
LIPA-202ENST00000336233 CBY1Q9Y3M2 126 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 NKX2-6A6NCS4 301 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 MT-CO3P00414 261 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 WNT2P09544 360 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 SCTP09683 121 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 PVALBP20472 110 aaPredicted RBP12.18□□□□□ -0.46
LIPA-202ENST00000336233 IL24Q13007 206 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 C9orf152Q5JTZ5 239 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 MEX3BQ6ZN04 569 aaKnown RBP12.18□□□□□ -0.46
LIPA-202ENST00000336233 ZNF818PQ6ZRF7 136 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 BATF2Q8N1L9 274 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 SVIPQ8NHG7 77 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 SCRT1Q9BWW7 348 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 IL36RNQ9UBH0 155 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 LHX6Q9UPM6 363 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 KPTNQ9Y664 436 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 IGKV1-6A0A0C4DH72 117 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 C9JQL5 133 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 SYNGR1O43759 233 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 F12P00748 615 aaPredicted RBP12.18□□□□□ -0.46
LIPA-202ENST00000336233 IFNA4P05014 189 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 GLI4P10075 376 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 MMP9P14780 707 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 PAX6P26367 422 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 CD80P33681 288 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 SNCAP37840 140 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 WNT5AP41221 380 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 EWSR1Q01844 656 aaKnown RBP eCLIP12.18□□□□□ -0.46
LIPA-202ENST00000336233 LINC00696Q6ZRV3 163 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 ZNF573Q86YE8 665 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 ZFP62Q8NB50 900 aaPredicted RBP12.18□□□□□ -0.46
LIPA-202ENST00000336233 OR1K1Q8NGR3 316 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 MRPL30Q8TCC3 161 aaKnown RBP12.18□□□□□ -0.46
LIPA-202ENST00000336233 C2CD4CQ8TF44 421 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 GP6Q9HCN6 339 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 CACFD1Q9UGQ2 172 aa12.18□□□□□ -0.46
LIPA-202ENST00000336233 UBE2J1Q9Y385 318 aaPredicted RBP12.18□□□□□ -0.46
LIPA-202ENST00000336233 SHANK1Q9Y566 2161 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 ANKRD30BLA7E2S9 258 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 KLRC4-KLRK1H3BQV0 150 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 PITX3O75364 302 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 LY86O95711 162 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 NMSQ5H8A3 153 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 FAM76BQ5HYJ3 339 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 ZNF695Q8IW36 515 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 MCEMP1Q8IX19 187 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 GAPTQ8N292 157 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 OR2C3Q8N628 320 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 ARHGAP21Q5T5U3 1957 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 IGKV1D-13A0A0B4J2D9 117 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 H0Y980 276 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 J3QW42 95 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 TSPAN15O95858 294 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 IGKV1-13P0DP09 117 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 APLNRP35414 380 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 ID4P47928 161 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 GNG3P63215 75 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 CLEC9AQ6UXN8 241 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 SUMF2Q8NBJ7 301 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 OR5D13Q8NGL4 314 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 SECTM1Q8WVN6 248 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 BCL2L2Q92843 193 aaPredicted RBP12.17□□□□□ -0.46
LIPA-202ENST00000336233 FER1L6-AS2Q96M78 137 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 CABLES2Q9BTV7 478 aa12.17□□□□□ -0.46
LIPA-202ENST00000336233 IL18BPO95998 194 aa12.16□□□□□ -0.46
LIPA-202ENST00000336233 NKX2-1P43699 371 aaPredicted RBP12.16□□□□□ -0.46
LIPA-202ENST00000336233 NHLH2Q02577 135 aa12.16□□□□□ -0.46
LIPA-202ENST00000336233 MIDNQ504T8 468 aa12.16□□□□□ -0.46
LIPA-202ENST00000336233 NANOS1Q8WY41 292 aaKnown RBP12.16□□□□□ -0.46
LIPA-202ENST00000336233 C19orf12Q9NSK7 152 aa12.16□□□□□ -0.46
LIPA-202ENST00000336233 PIGBOS1A0A0B4J2F0 54 aa12.16□□□□□ -0.46
LIPA-202ENST00000336233 A0A1B0GW64 132 aa12.16□□□□□ -0.46
LIPA-202ENST00000336233 NPIPB11E5RHQ5 1161 aa12.16□□□□□ -0.46
LIPA-202ENST00000336233 NOVA1P51513 510 aaKnown RBP12.16□□□□□ -0.46
LIPA-202ENST00000336233 PCSK4Q6UW60 755 aa12.16□□□□□ -0.46
LIPA-202ENST00000336233 LYRM2Q9NU23 88 aaPredicted RBP12.16□□□□□ -0.46
LIPA-202ENST00000336233 PRSS50Q9UI38 385 aa12.16□□□□□ -0.46
LIPA-202ENST00000336233 CDX4O14627 284 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms