RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 NAPSAO96009 420 aa11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 ETV6P41212 452 aa11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 C11orf91Q3C1V1 193 aa11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 CD276Q5ZPR3 534 aa11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 PYHIN1Q6K0P9 492 aa11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 CIARTQ8N365 385 aaPredicted RBP11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 OR4K15Q8NH41 348 aa11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 MRPL30Q8TCC3 161 aaKnown RBP11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 CCDC107Q8WV48 283 aa11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 RIMS4Q9H426 269 aaPredicted RBP11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 LPAR2Q9HBW0 351 aa11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 CHMP1AQ9HD42 196 aaPredicted RBP11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 C12orf4Q9NQ89 552 aa11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 RPUSD1Q9UJJ7 312 aaKnown RBP11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 V9GYH0 126 aa11.34□□□□□ -0.59
TUBA1B-202ENST00000336023 CSPG4Q6UVK1 2322 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 ACANP16112 2415 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 TRAV39A0A0B4J263 110 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 SSX5O60225 188 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 PRSS3P35030 304 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 PITPNAQ00169 270 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 GUCA2AQ02747 115 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 MEF2CQ06413 473 aaPredicted RBP11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 TMEM200BQ69YZ2 307 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 FAM185AQ8N0U4 392 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 C15orf40Q8WUR7 153 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 C1orf159Q96HA4 380 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 NCOR1P1Q9H4R4 102 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 RABL2AQ9UBK7 228 aaPredicted RBP11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 TRAPPC2LQ9UL33 140 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 RABL2BQ9UNT1 228 aa11.33□□□□□ -0.6
TUBA1B-202ENST00000336023 A0A1W2PQ09 198 aa11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 hADV38S2A0JD32 116 aa11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 MEIOCA2RUB1 952 aa11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 B4DSR2 109 aa11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 RCC1P18754 421 aaPredicted RBP11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 TMEM249Q2WGJ8 235 aa11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 Q6ZPA2 131 aa11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 TCF23Q7RTU1 214 aa11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 OR13A1Q8NGR1 328 aa11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 C8orf46Q8TAG6 207 aa11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 OR6C3Q9NZP0 311 aa11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 LPAR3Q9UBY5 353 aa11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 ZNF230Q9UIE0 474 aaPredicted RBP11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 POLR3KQ9Y2Y1 108 aaPredicted RBP11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 SVEP1Q4LDE5 3571 aa11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 ABCA2Q9BZC7 2435 aa11.32□□□□□ -0.6
TUBA1B-202ENST00000336023 TRGV10A0A0A0MS01 117 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 TRBV6-6A0A0A6YYG2 114 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 PPIAL4CA0A0B4J2A2 164 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 SMAD7O15105 426 aaKnown RBP11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 FCGR3AP08637 254 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 PPIAL4GP0DN37 164 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 GLP1RP43220 463 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 PAX2Q02962 417 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 ZNF273Q14593 569 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 TRAPPC6BQ86SZ2 158 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 ZNF565Q8N9K5 539 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 LINC01356Q8N9X3 169 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 LY6G5BQ8NDX9 201 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 SETD6Q8TBK2 473 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 MRGPRDQ8TDS7 321 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 SCPEP1Q9HB40 452 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 AKIP1Q9NQ31 210 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 MMP26Q9NRE1 261 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 LINC00312Q9Y6C7 94 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 DOCK11Q5JSL3 2073 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 MEIS3P1A6NDR6 274 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 POM121CA8CG34 1229 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 SULT1C2O00338 296 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 ENSAO43768 121 aaKnown RBP11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 LPLP06858 475 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 MSMBP08118 114 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 IGHV4-31P0DP07 118 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 DTYMKP23919 212 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 PTBP1P26599 531 aaKnown RBP eCLIP11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 ZNF45Q02386 682 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 ZNF79Q15937 498 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 CR1LQ2VPA4 569 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 PYDC2Q56P42 97 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 RNASE12Q5GAN4 147 aaKnown RBP11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 ZNF880Q6PDB4 577 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 MFSD4AQ8N468 514 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 OR52I2Q8NH67 350 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 GPX8Q8TED1 209 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 CORO2AQ92828 525 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 DACT3Q96B18 629 aaPredicted RBP11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 MSI2Q96DH6 328 aaKnown RBP11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 OCSTAMPQ9BR26 566 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 ST6GALNAC5Q9BVH7 336 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 Q9N2K0 584 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 MBNL3Q9NUK0 354 aaKnown RBP11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 UBE2J1Q9Y385 318 aaPredicted RBP11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 ARHGAP32A7KAX9 2087 aa11.31□□□□□ -0.6
TUBA1B-202ENST00000336023 TLN2Q9Y4G6 2542 aa11.3□□□□□ -0.6
TUBA1B-202ENST00000336023 IGHV2-70DA0A0C4DH43 119 aa11.3□□□□□ -0.6
TUBA1B-202ENST00000336023 KIR2DS1A0A191URI9 304 aa11.3□□□□□ -0.6
TUBA1B-202ENST00000336023 GABARAPH6UMI1 98 aa11.3□□□□□ -0.6
TUBA1B-202ENST00000336023 CTDSPLO15194 276 aa11.3□□□□□ -0.6
TUBA1B-202ENST00000336023 LIPFP07098 398 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms