RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 ZBTB34Q8NCN2 500 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 EMG1Q92979 244 aaKnown RBP7.48□□□□□ -1.21
TDP1-201ENST00000335725 DNAJA3Q96EY1 480 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 CKLFQ9UBR5 152 aa7.48□□□□□ -1.21
TDP1-201ENST00000335725 SBF1O95248 1867 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 FAM231BA6NCW3 169 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 C19orf67A6NJJ6 358 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 SHISA8B8ZZ34 492 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 F2RL2O00254 374 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 P2RY10O00398 339 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 SH2D1BO14796 132 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 KLKB1P03952 638 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 ZGLP1P0C6A0 271 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 TAS2R50P59544 299 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 PRICKLE4Q2TBC4 344 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 VAX1Q5SQQ9 334 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 ZNF676Q8N7Q3 588 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 OR4A5Q8NH83 315 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 ANAPC13Q9BS18 74 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 FNDC4Q9H6D8 234 aaPredicted RBP7.47□□□□□ -1.21
TDP1-201ENST00000335725 CYSLTR1Q9Y271 337 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 KIAA1671Q9BY89 1806 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 SAA2-SAA4A0A096LPE2 208 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 A0A0J9YY10 115 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 A0A1B0GX78 115 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 C9orf118A6NHY6 69 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 TMEM212A6NML5 194 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 CEBPZOSA8MTT3 80 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 LATO43561 262 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 SRFP11831 508 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 OTX2P32243 289 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 RHOBP62745 196 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 ALKBH6Q3KRA9 238 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 ZNF787Q6DD87 383 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 SLC25A34Q6PIV7 304 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 FOXI2Q6ZQN5 318 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 ZNF550Q7Z398 422 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 RNF183Q96D59 192 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 PCED1BQ96HM7 432 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 GMPPAQ96IJ6 420 aaPredicted RBP7.47□□□□□ -1.21
TDP1-201ENST00000335725 TSSK2Q96PF2 358 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 RSPO3Q9BXY4 272 aaPredicted RBP7.47□□□□□ -1.21
TDP1-201ENST00000335725 WNT10AQ9GZT5 417 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 FAM206AQ9NX38 181 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 POLR1DQ9Y2S0 133 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 SMIM28A0A1B0GU29 152 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 B5MCH6 92 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 PITX3O75364 302 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 DNASE1L1P49184 302 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 SUPT4H1P63272 117 aaKnown RBP7.47□□□□□ -1.21
TDP1-201ENST00000335725 CHRDL2Q6WN34 429 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 DAZAP1Q96EP5 407 aaKnown RBP7.47□□□□□ -1.21
TDP1-201ENST00000335725 CALHM2Q9HA72 323 aa7.47□□□□□ -1.21
TDP1-201ENST00000335725 TRAV9-1A0A075B6T8 112 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 TEX48A0A1B0GUV7 120 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 MEGF11A6BM72 1044 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 H0Y980 276 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 TMEM250H0YL14 139 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 HPNP05981 417 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 C3orf79P0CE67 100 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 PGCP20142 388 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 NTSR1P30989 418 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 ECI1P42126 302 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 FMODQ06828 376 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 IHHQ14623 411 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 C2orf73Q8N5S3 287 aaPredicted RBP7.46□□□□□ -1.21
TDP1-201ENST00000335725 RFLNBQ8N5W9 214 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 PTH2Q96A98 100 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 GRAMD2BQ96HH9 432 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 PRSS16Q9NQE7 514 aa7.46□□□□□ -1.21
TDP1-201ENST00000335725 COL4A1P02462 1669 aa7.46□□□□□ -1.22
TDP1-201ENST00000335725 TICRRQ7Z2Z1 1910 aa7.46□□□□□ -1.22
TDP1-201ENST00000335725 H3BRM9 83 aa7.46□□□□□ -1.22
TDP1-201ENST00000335725 CDC42EP2O14613 210 aa7.46□□□□□ -1.22
TDP1-201ENST00000335725 ST8SIA3O43173 380 aa7.46□□□□□ -1.22
TDP1-201ENST00000335725 LINC00869P0C866 280 aa7.46□□□□□ -1.22
TDP1-201ENST00000335725 IL9P15248 144 aa7.46□□□□□ -1.22
TDP1-201ENST00000335725 NANOS3P60323 173 aaKnown RBP7.46□□□□□ -1.22
TDP1-201ENST00000335725 ZNF595Q8IYB9 648 aa7.46□□□□□ -1.22
TDP1-201ENST00000335725 FAM174AQ8TBP5 190 aa7.46□□□□□ -1.22
TDP1-201ENST00000335725 NANOS1Q8WY41 292 aaKnown RBP7.46□□□□□ -1.22
TDP1-201ENST00000335725 MS4A5Q9H3V2 200 aa7.46□□□□□ -1.22
TDP1-201ENST00000335725 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.46□□□□□ -1.22
TDP1-201ENST00000335725 HCFC2Q9Y5Z7 792 aa7.46□□□□□ -1.22
TDP1-201ENST00000335725 SCN8AQ9UQD0 1980 aa7.46□□□□□ -1.22
TDP1-201ENST00000335725 LRP5LA4QPB2 252 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 SAP18O00422 153 aaKnown RBP7.45□□□□□ -1.22
TDP1-201ENST00000335725 SCGB2A1O75556 95 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 HLA-DRB1P01911 266 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 PSG2P11465 335 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 ZNF17P17021 662 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 LHX2P50458 406 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 FABP6P51161 128 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 GNG3P63215 75 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 ZNF74Q16587 644 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 DCAF4L1Q3SXM0 396 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 CTXN3Q4LDR2 81 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 FAM78AQ5JUQ0 283 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 FBXL14Q8N1E6 418 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 KCNS1Q96KK3 526 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms