RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SCTP09683 121 aa20.31■□□□□ 0.84
TSKU-201ENST00000333090 IGKV1-13P0DP09 117 aa20.31■□□□□ 0.84
TSKU-201ENST00000333090 VDAC1P21796 283 aa20.31■□□□□ 0.84
TSKU-201ENST00000333090 RPS18P62269 152 aaKnown RBP20.31■□□□□ 0.84
TSKU-201ENST00000333090 TDHQ8IZJ6 230 aa20.31■□□□□ 0.84
TSKU-201ENST00000333090 C1orf87Q8N0U7 546 aa20.31■□□□□ 0.84
TSKU-201ENST00000333090 hCG_38984A0A1B0GV85 526 aa20.3■□□□□ 0.84
TSKU-201ENST00000333090 ZIC3O60481 467 aa20.3■□□□□ 0.84
TSKU-201ENST00000333090 TAS2R30P59541 319 aa20.3■□□□□ 0.84
TSKU-201ENST00000333090 MPV17LQ2QL34 196 aa20.3■□□□□ 0.84
TSKU-201ENST00000333090 LOC102723971A0A1B0GUV8 181 aa20.3■□□□□ 0.84
TSKU-201ENST00000333090 RPL36A-HNRNPH2H7BZ11 118 aa20.3■□□□□ 0.84
TSKU-201ENST00000333090 PLPPR1Q8TBJ4 325 aa20.3■□□□□ 0.84
TSKU-201ENST00000333090 ABHD14BQ96IU4 210 aa20.3■□□□□ 0.84
TSKU-201ENST00000333090 PHF7Q9BWX1 381 aaPredicted RBP20.3■□□□□ 0.84
TSKU-201ENST00000333090 HSPB6O14558 160 aa20.29■□□□□ 0.84
TSKU-201ENST00000333090 PTBP3O95758 552 aaKnown RBP20.29■□□□□ 0.84
TSKU-201ENST00000333090 CEACAM1P13688 526 aa20.29■□□□□ 0.84
TSKU-201ENST00000333090 NTF4P34130 210 aa20.29■□□□□ 0.84
TSKU-201ENST00000333090 TMEM38BQ9NVV0 291 aa20.29■□□□□ 0.84
TSKU-201ENST00000333090 OR6C6A6NF89 314 aa20.29■□□□□ 0.84
TSKU-201ENST00000333090 HLA-HP01893 362 aa20.29■□□□□ 0.84
TSKU-201ENST00000333090 CST2P09228 141 aa20.29■□□□□ 0.84
TSKU-201ENST00000333090 LIFP15018 202 aa20.29■□□□□ 0.84
TSKU-201ENST00000333090 PSG4Q00888 419 aa20.29■□□□□ 0.84
TSKU-201ENST00000333090 C17orf78Q8N4C9 275 aa20.29■□□□□ 0.84
TSKU-201ENST00000333090 CCL28Q9NRJ3 127 aa20.29■□□□□ 0.84
TSKU-201ENST00000333090 SLC22A20A6NK97 555 aa20.28■□□□□ 0.84
TSKU-201ENST00000333090 ZNF468Q5VIY5 522 aaPredicted RBP20.28■□□□□ 0.84
TSKU-201ENST00000333090 ZNF385CQ66K41 422 aaPredicted RBP20.28■□□□□ 0.84
TSKU-201ENST00000333090 PRO1933Q9H354 126 aa20.28■□□□□ 0.84
TSKU-201ENST00000333090 UFSP2Q9NUQ7 469 aa20.28■□□□□ 0.84
TSKU-201ENST00000333090 B4DEV8 164 aa20.28■□□□□ 0.84
TSKU-201ENST00000333090 UCP1P25874 307 aa20.28■□□□□ 0.84
TSKU-201ENST00000333090 PAX9P55771 341 aa20.28■□□□□ 0.84
TSKU-201ENST00000333090 DSCR4P56555 118 aaPredicted RBP20.28■□□□□ 0.84
TSKU-201ENST00000333090 FAM90A2PQ658T7 463 aa20.28■□□□□ 0.84
TSKU-201ENST00000333090 STX12Q86Y82 276 aa20.28■□□□□ 0.84
TSKU-201ENST00000333090 ZNF816-ZNF321PA0A0X1KG74 233 aa20.27■□□□□ 0.84
TSKU-201ENST00000333090 BCAT2O15382 392 aaPredicted RBP20.27■□□□□ 0.84
TSKU-201ENST00000333090 IL24Q13007 206 aa20.27■□□□□ 0.84
TSKU-201ENST00000333090 FGFBP3Q8TAT2 258 aa20.27■□□□□ 0.84
TSKU-201ENST00000333090 ZNF665Q9H7R5 613 aa20.27■□□□□ 0.84
TSKU-201ENST00000333090 CLEC18AA5D8T8 446 aa20.27■□□□□ 0.84
TSKU-201ENST00000333090 TMEM267Q0VDI3 215 aaPredicted RBP20.27■□□□□ 0.84
TSKU-201ENST00000333090 LCN15Q6UWW0 184 aa20.27■□□□□ 0.84
TSKU-201ENST00000333090 CLEC18CQ8NCF0 446 aa20.27■□□□□ 0.84
TSKU-201ENST00000333090 MEGF10Q96KG7 1140 aa20.27■□□□□ 0.84
TSKU-201ENST00000333090 SNX22Q96L94 193 aa20.27■□□□□ 0.84
TSKU-201ENST00000333090 RSG1Q9BU20 258 aa20.27■□□□□ 0.84
TSKU-201ENST00000333090 TAAR3PQ9P1P4 343 aa20.27■□□□□ 0.84
TSKU-201ENST00000333090 RNF115Q9Y4L5 304 aa20.27■□□□□ 0.84
TSKU-201ENST00000333090 CLDN34H7C241 214 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 IFNA5P01569 189 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 HERPUD1Q15011 391 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 DPPA3Q6W0C5 159 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 SSX9Q7RTT3 188 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 NEK7Q8TDX7 302 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 A0A1B0GV90 55 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 PGA5P0DJD9 388 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 MMP9P14780 707 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 MDKP21741 143 aaPredicted RBP20.26■□□□□ 0.83
TSKU-201ENST00000333090 COL19A1Q14993 1142 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 PACRGQ96M98 296 aaPredicted RBP20.26■□□□□ 0.83
TSKU-201ENST00000333090 Q9N2K0 584 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 TOX3O15405 576 aaPredicted RBP20.26■□□□□ 0.83
TSKU-201ENST00000333090 UNQ6494/PRO21346Q6UXR6 183 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 M1APQ8TC57 530 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 WNT5BQ9H1J7 359 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 PROK2Q9HC23 129 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 RPRMQ9NS64 109 aa20.26■□□□□ 0.83
TSKU-201ENST00000333090 DFFBO76075 338 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 BCL3P20749 454 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 FGF8P55075 233 aaPredicted RBP20.25■□□□□ 0.83
TSKU-201ENST00000333090 ZNF787Q6DD87 383 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 SSX3Q99909 188 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 OR2H1Q9GZK4 316 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 ZNF391Q9UJN7 358 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 ZNF407Q9C0G0 2248 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 A0A1B0GU03 582 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 DUXBA0A1W2PPF3 345 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 RNF224P0DH78 156 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 BCL2P10415 239 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 DDTP30046 118 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 RAC1P63000 192 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 PCOLCEQ15113 449 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 GUSBP11Q6P575 273 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 ZNF880Q6PDB4 577 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 FAM180AQ6UWF9 173 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 OR10G4Q8NGN3 311 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 HS3ST6Q96QI5 342 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 VSIRQ9H7M9 311 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 LRFN1Q9P244 771 aa20.25■□□□□ 0.83
TSKU-201ENST00000333090 A0A0G2JRQ6 117 aa20.24■□□□□ 0.83
TSKU-201ENST00000333090 CYB5R3P00387 301 aaPredicted RBP20.24■□□□□ 0.83
TSKU-201ENST00000333090 IZUMO4Q1ZYL8 232 aa20.24■□□□□ 0.83
TSKU-201ENST00000333090 H1FOOQ8IZA3 346 aaPredicted RBP20.24■□□□□ 0.83
TSKU-201ENST00000333090 FOXB1Q99853 325 aa20.24■□□□□ 0.83
TSKU-201ENST00000333090 HIPK2Q9H2X6 1198 aa20.24■□□□□ 0.83
TSKU-201ENST00000333090 UBE2ZQ9H832 354 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms