RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 J3QT63 122 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 ST8SIA3O43173 380 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 GAPDHP04406 335 aaKnown RBP12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 GLAP06280 429 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 ATF4P18848 351 aaPredicted RBP12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 ID4P47928 161 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 TGFBR3Q03167 851 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 IL13RA2Q14627 380 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 EIF5AL1Q6IS14 154 aaKnown RBP12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 PCSK4Q6UW60 755 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 FAM214BQ7L5A3 538 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 DMBX1Q8NFW5 382 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 OR4D5Q8NGN0 318 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 PARP12Q9H0J9 701 aaKnown RBP12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 WFDC1Q9HC57 220 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 ATG12O94817 140 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 SELEP16581 610 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 ZNF695Q8IW36 515 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 SLC25A40Q8TBP6 338 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 RTL8AQ9BWD3 113 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 FAM96BQ9Y3D0 163 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 KIAA2026Q5HYC2 2103 aa12.64□□□□□ -0.39
CLCNKA-201ENST00000331433 RIF1Q5UIP0 2472 aaKnown RBP12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 DEGS1O15121 323 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 SULT1A2P50226 295 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 NHLH2Q02577 135 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 VWA1Q6PCB0 445 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 SCCPDHQ8NBX0 429 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 SAT2Q96F10 170 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 NKX6-2Q9C056 277 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 RIMS4Q9H426 269 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 TREM1Q9NP99 234 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 CACNA1GO43497 2377 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 FAM74A7A6NL05 159 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 SIRPB1O00241 398 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 CDIPTO14735 213 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 GPR137BO60478 399 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 RND3P61587 244 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 SRPXP78539 464 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 PJVKQ0ZLH3 352 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 MRPL49Q13405 166 aaKnown RBP12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 GABRA6Q16445 453 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 GUCA2BQ16661 112 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 FAM74A3Q4VXF1 159 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 Q6P435 159 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 SELENOHQ8IZQ5 122 aaKnown RBP12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 UBAC2Q8NBM4 344 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 LILRB1Q8NHL6 650 aaPredicted RBP12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 IL1F10Q8WWZ1 152 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 GTF3AQ92664 365 aaKnown RBP12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 KIRREL1Q96J84 757 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 TMEM56Q96MV1 263 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 TSNAXQ99598 290 aaKnown RBP12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 ADAT1Q9BUB4 502 aaKnown RBP12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 TMEM56-RWDD3S4R434 201 aa12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 INTS1Q8N201 2190 aaKnown RBP12.63□□□□□ -0.39
CLCNKA-201ENST00000331433 DNASE2O00115 360 aaPredicted RBP12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 AGPAT2O15120 278 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 AGFG2O95081 481 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 CTXN2P0C2S0 81 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 ASCL1P50553 236 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 IL34Q6ZMJ4 242 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 Q6ZT83 130 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 C9orf106Q8NAJ2 232 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 OR1J1Q8NGS3 322 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 RHOFQ9HBH0 211 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 GLRX2Q9NS18 164 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 POMT1Q9Y6A1 747 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 LRP5LA4QPB2 252 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 H0YL77 283 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 ADAM20O43506 726 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 P2RY1P47900 373 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 UCP2P55851 309 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 HLA-DRB3P79483 266 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 PSG7Q13046 419 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 ZNF154Q13106 437 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 DEFB109BQ30KR1 87 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 FAM76BQ5HYJ3 339 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 PRR18Q8N4B5 295 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 OR10J5Q8NHC4 309 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 UBALD1Q8TB05 177 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 MAGT1Q9H0U3 335 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 ZFP57Q9NU63 452 aa12.62□□□□□ -0.39
CLCNKA-201ENST00000331433 TRBV6-6A0A0A6YYG2 114 aa12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 F8W036 122 aa12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 ZNF292O60281 2723 aa12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 CDS2O95674 445 aa12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 OR2H2O95918 312 aa12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 F12P00748 615 aaPredicted RBP12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 MUC1P15941 1255 aaPredicted RBP12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 MPV17P39210 176 aa12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 KIR2DL2P43627 348 aaPredicted RBP12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 POLR2GP62487 172 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 BLOC1S1P78537 153 aa12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 GNMTQ14749 295 aa12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 GUSBP1Q15486 140 aa12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 GPR157Q5UAW9 335 aa12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 ZNF324BQ6AW86 544 aaPredicted RBP12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 ZNF880Q6PDB4 577 aa12.61□□□□□ -0.39
CLCNKA-201ENST00000331433 Q6ZRG5 221 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms