RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SSX5O60225 188 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 GNG3P63215 75 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 PEA15Q15121 130 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 SLC9A3R2Q15599 337 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 PHLDA2Q53GA4 152 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 LY6G6FQ5SQ64 297 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 ARL11Q969Q4 196 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 COA4Q9NYJ1 87 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 TAS2R8Q9NYW2 309 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 BCL2L11O43521 198 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 DAOP14920 347 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 PRB3Q04118 309 aaPredicted RBP13.59□□□□□ -0.23
PDGFB-201ENST00000331163 NGBQ9NPG2 151 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 RPS10P5Q9NQ39 176 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 CFAP46Q8IYW2 2715 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 MPTX1A8MV57 137 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 LYNX1G3V0Z9 82 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 ACAA1P09110 424 aaPredicted RBP13.59□□□□□ -0.23
PDGFB-201ENST00000331163 LYNX1P0DP58 116 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 ZNF14P17017 642 aaPredicted RBP13.59□□□□□ -0.23
PDGFB-201ENST00000331163 NDUFB7P17568 137 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 NAAAQ02083 359 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 UNC119Q13432 240 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 ABCA11PQ4W5N1 156 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 SECTM1Q8WVN6 248 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 PLK3Q9H4B4 646 aa13.59□□□□□ -0.23
PDGFB-201ENST00000331163 A8MXE2 369 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 DEFB108AA8MXU0 73 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 MSTNO14793 375 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 NDUFS6O75380 124 aaKnown RBP13.58□□□□□ -0.24
PDGFB-201ENST00000331163 CRYGSP22914 178 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 GLP1RP43220 463 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 RAB5BP61020 215 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 ZFP57Q9NU63 452 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 IGHV1-18A0A0C4DH31 117 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 A0A0U1RQV5 110 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 M0R036 132 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 SMPD2O60906 423 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 NXPH3O95157 252 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 SNAPINO95295 136 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 SNRNP70P08621 437 aaKnown RBP13.58□□□□□ -0.24
PDGFB-201ENST00000331163 OR2B8PP59922 312 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 S100A10P60903 97 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 LHFPL2Q6ZUX7 228 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 LRRC29Q8WV35 223 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 HS3ST6Q96QI5 342 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 RNF150Q9ULK6 438 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 IGHV2OR16-5A0A0B4J2B6 119 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 TNFSF12O43508 249 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 ISG15P05161 165 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 ACTBP60709 375 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 ACTG1P63261 375 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 KCNMB1Q16558 191 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 ATPAF1Q5TC12 328 aaPredicted RBP13.58□□□□□ -0.24
PDGFB-201ENST00000331163 WFIKKN1Q96NZ8 548 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 ETV7Q9Y603 341 aa13.58□□□□□ -0.24
PDGFB-201ENST00000331163 hCG_38984A0A1B0GV85 526 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 SCGB1D2O95969 90 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 OMGP23515 440 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 CALCRP30988 508 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 CD80P33681 288 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 PPP1R1AQ13522 171 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 CLINT1Q14677 625 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 OR2B11Q5JQS5 317 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 MEX3BQ6ZN04 569 aaKnown RBP13.57□□□□□ -0.24
PDGFB-201ENST00000331163 ACOT7LQ6ZUV0 252 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 GLYATL2Q8WU03 294 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 IGHV3-43A0A0B4J1X8 118 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 IGHV3-43DP0DP04 118 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 CEBPGP53567 150 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 HERV-K104P61576 105 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 ZNF573Q86YE8 665 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 KCNRGQ8N5I3 272 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 ZSCAN4Q8NAM6 433 aaPredicted RBP13.57□□□□□ -0.24
PDGFB-201ENST00000331163 SFXN3Q9BWM7 321 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 SMIM3Q9BZL3 60 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 MIOXQ9UGB7 285 aa13.57□□□□□ -0.24
PDGFB-201ENST00000331163 FAM76BQ5HYJ3 339 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 OR2V2Q96R30 315 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 IGKV1-27A0A075B6S5 117 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 C1orf196B1AJZ1 125 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 OR4A8P0C604 315 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 TAS2R19P59542 299 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 C9orf152Q5JTZ5 239 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 EIF4E3Q8N5X7 224 aaKnown RBP13.56□□□□□ -0.24
PDGFB-201ENST00000331163 OR13G1Q8NGZ3 307 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 ITLN1Q8WWA0 313 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 SPSB1Q96BD6 273 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 PLSCR4Q9NRQ2 329 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 LAMP3Q9UQV4 416 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 EXPH5Q8NEV8 1989 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 RNF222A6NCQ9 220 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 PLAUP00749 431 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 TNFAIP6P98066 277 aaPredicted RBP13.56□□□□□ -0.24
PDGFB-201ENST00000331163 FIP1L1Q6UN15 594 aaKnown RBP13.56□□□□□ -0.24
PDGFB-201ENST00000331163 C15orf40Q8WUR7 153 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 UBTD1Q9HAC8 227 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 TNFSF18Q9UNG2 199 aa13.56□□□□□ -0.24
PDGFB-201ENST00000331163 YLPM1P49750 1951 aaKnown RBP13.56□□□□□ -0.24
PDGFB-201ENST00000331163 ARFGEF3Q5TH69 2177 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms