RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 A0A1W2PR77 199 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 PNRC1Q12796 327 aaPredicted RBP12.44□□□□□ -0.42
SNX20-202ENST00000330943 ZNF774Q6NX45 483 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 FAM180AQ6UWF9 173 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 ASCL4Q6XD76 172 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 BCL2P10415 239 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 FGF8P55075 233 aaPredicted RBP12.44□□□□□ -0.42
SNX20-202ENST00000330943 RBM11P57052 281 aaKnown RBP12.44□□□□□ -0.42
SNX20-202ENST00000330943 HNRNPKP61978 463 aaKnown RBP eCLIP12.44□□□□□ -0.42
SNX20-202ENST00000330943 ID3Q02535 119 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 TMEM267Q0VDI3 215 aaPredicted RBP12.44□□□□□ -0.42
SNX20-202ENST00000330943 OR8B8Q15620 311 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 NMSQ5H8A3 153 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 ZNF787Q6DD87 383 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 TMEM211Q6ICI0 200 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 FOXL2NBQ6ZUU3 175 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 TSTD1Q8NFU3 115 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 OR10G4Q8NGN3 311 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 RCC1LQ96I51 464 aaKnown RBP12.44□□□□□ -0.42
SNX20-202ENST00000330943 RSG1Q9BU20 258 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 GPR87Q9BY21 358 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 PTRH2Q9Y3E5 179 aaKnown RBP12.44□□□□□ -0.42
SNX20-202ENST00000330943 EML6Q6ZMW3 1958 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 TGOLN2O43493 480 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 CRYGSP22914 178 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 RPS18P62269 152 aaKnown RBP12.43□□□□□ -0.42
SNX20-202ENST00000330943 NKAIN1Q4KMZ8 207 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 DPPA3Q6W0C5 159 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 PLPPR1Q8TBJ4 325 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 ABHD14BQ96IU4 210 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 FSCN3Q9NQT6 498 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 TMEM242Q9NWH2 141 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 BDP1A6H8Y1 2624 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 ZFAND5O76080 213 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 IFNA5P01569 189 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 PATE4P0C8F1 98 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 VDAC1P21796 283 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 H3F3AP84243 136 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 ZFP36L1Q07352 338 aaKnown RBP12.43□□□□□ -0.42
SNX20-202ENST00000330943 IL24Q13007 206 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 WDR5BQ86VZ2 330 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 TMEM183AQ8IXX5 376 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 H1FOOQ8IZA3 346 aaPredicted RBP12.43□□□□□ -0.42
SNX20-202ENST00000330943 OR4X1Q8NH49 305 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 LURAP1Q96LR2 239 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 RPRMQ9NS64 109 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 DKKL1Q9UK85 242 aa12.43□□□□□ -0.42
SNX20-202ENST00000330943 TRBV24-1A0A075B6N3 115 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 IGHV1OR15-9A0A0B4J2B8 117 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 IGKV1D-13A0A0B4J2D9 117 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 OPN1MWP04001 364 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 SNRPCP09234 159 aaKnown RBP12.42□□□□□ -0.42
SNX20-202ENST00000330943 OPN1MW2P0DN77 364 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 OPN1MW3P0DN78 364 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 IGKV1-13P0DP09 117 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 GZMBP10144 247 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 MMP9P14780 707 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 FGF7P21781 194 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 PAX9P55771 341 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 MRPS34P82930 218 aaKnown RBP12.42□□□□□ -0.42
SNX20-202ENST00000330943 PLCXD3Q63HM9 321 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 RHBDD2Q6NTF9 364 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 MAML2Q8IZL2 1156 aaPredicted RBP12.42□□□□□ -0.42
SNX20-202ENST00000330943 SPACA9Q96E40 222 aaPredicted RBP12.42□□□□□ -0.42
SNX20-202ENST00000330943 VSIRQ9H7M9 311 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 SDF2L1Q9HCN8 221 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 CISD1Q9NZ45 108 aaKnown RBP12.42□□□□□ -0.42
SNX20-202ENST00000330943 GAB2Q9UQC2 676 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 TIAF1O95411 115 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 AMBPP02760 352 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 TK1P04183 234 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 CD27P26842 260 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 JOSD1Q15040 202 aaPredicted RBP12.42□□□□□ -0.42
SNX20-202ENST00000330943 OR10A7Q8NGE5 316 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 PIGCQ92535 297 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 RASL10BQ96S79 203 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 C2orf88Q9BSF0 95 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 FAM86C1Q9NVL1 165 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 WNT16Q9UBV4 365 aa12.42□□□□□ -0.42
SNX20-202ENST00000330943 TRAV1-1A0A0B4J248 108 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 MKRN2OSH3BPM6 223 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 CD55P08174 381 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 NPBWR2P48146 333 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 RAB35Q15286 201 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 WDR25Q64LD2 544 aaPredicted RBP12.41□□□□□ -0.42
SNX20-202ENST00000330943 CARFQ8N187 725 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 EXTL1Q92935 676 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 HIPK2Q9H2X6 1198 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 CDH20Q9HBT6 801 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 PLSCR2Q9NRY7 297 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 TAAR3PQ9P1P4 343 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 CEBPZOSA8MTT3 80 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 SYNGR3O43761 229 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 DFFBO76075 338 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 SCTP09683 121 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 PAX1P15863 534 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 TUBG1P23258 451 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 FAM27BQ5VT28 67 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 RAET1LQ5VY80 246 aa12.41□□□□□ -0.42
SNX20-202ENST00000330943 CALHM1Q8IU99 346 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms