RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 FAM3AP98173 230 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 SLC52A3Q9NQ40 469 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 BET1LQ9NYM9 111 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 LOC102723971A0A1B0GUV8 181 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 HTN1P15515 57 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 S100A4P26447 101 aaKnown RBP8.91□□□□□ -0.98
CHD3-201ENST00000330494 PMELP40967 661 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 LSM6P62312 80 aaKnown RBP8.91□□□□□ -0.98
CHD3-201ENST00000330494 GAPTQ8N292 157 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 TMEM251Q8N6I4 163 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 CXorf58Q96LI9 332 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 TMEM147Q9BVK8 224 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 Q6ZN92 141 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 NUFIP2Q7Z417 695 aaKnown RBP8.91□□□□□ -0.98
CHD3-201ENST00000330494 OR8B3Q8NGG8 313 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 MS4A10Q96PG2 267 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 OR8B2Q96RD0 313 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 SF3B5Q9BWJ5 86 aaKnown RBP8.91□□□□□ -0.98
CHD3-201ENST00000330494 WDR54Q9H977 334 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 PILRAQ9UKJ1 303 aa8.91□□□□□ -0.98
CHD3-201ENST00000330494 LMX1BO60663 402 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 PCP4P48539 62 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 C19orf57Q0VDD7 668 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 RSPO4Q2I0M5 234 aaPredicted RBP8.9□□□□□ -0.98
CHD3-201ENST00000330494 RAB1CQ92928 201 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 CCL28Q9NRJ3 127 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 STARD10Q9Y365 291 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 TMED3Q9Y3Q3 217 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 AP4M1O00189 453 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 G6PCP35575 357 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 NANOS3P60323 173 aaKnown RBP8.9□□□□□ -0.98
CHD3-201ENST00000330494 MMP26Q9NRE1 261 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 OR6C3Q9NZP0 311 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 LANCL1O43813 399 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 ACAA1P09110 424 aaPredicted RBP8.9□□□□□ -0.98
CHD3-201ENST00000330494 TMEM65Q6PI78 240 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 ZNF441Q8N8Z8 693 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 SLC26A10Q8NG04 563 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 PCGF1Q9BSM1 259 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 MIXL1Q9H2W2 232 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 GOLT1BQ9Y3E0 138 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 SIRT4Q9Y6E7 314 aaPredicted RBP8.9□□□□□ -0.98
CHD3-201ENST00000330494 B2MP61769 119 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 FUT5Q11128 374 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 DHRS7BQ6IAN0 325 aaPredicted RBP8.9□□□□□ -0.98
CHD3-201ENST00000330494 RAB18Q9NP72 206 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 RNF24Q9Y225 148 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 MPC1Q9Y5U8 109 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 RALGAPA2Q2PPJ7 1873 aa8.9□□□□□ -0.98
CHD3-201ENST00000330494 DNASE2O00115 360 aaPredicted RBP8.9□□□□□ -0.99
CHD3-201ENST00000330494 FGF2P09038 288 aa8.9□□□□□ -0.99
CHD3-201ENST00000330494 CNN1P51911 297 aaKnown RBP8.9□□□□□ -0.99
CHD3-201ENST00000330494 MRPS11P82912 194 aaKnown RBP8.9□□□□□ -0.99
CHD3-201ENST00000330494 COL10A1Q03692 680 aa8.9□□□□□ -0.99
CHD3-201ENST00000330494 FBXW9Q5XUX1 488 aa8.9□□□□□ -0.99
CHD3-201ENST00000330494 DHRS11Q6UWP2 260 aa8.9□□□□□ -0.99
CHD3-201ENST00000330494 AAMDCQ9H7C9 122 aa8.9□□□□□ -0.99
CHD3-201ENST00000330494 OOEPA6NGQ2 149 aa8.9□□□□□ -0.99
CHD3-201ENST00000330494 MPC2O95563 127 aa8.9□□□□□ -0.99
CHD3-201ENST00000330494 CEBPDP49716 269 aaPredicted RBP8.9□□□□□ -0.99
CHD3-201ENST00000330494 STARD6P59095 220 aa8.9□□□□□ -0.99
CHD3-201ENST00000330494 RHOBP62745 196 aa8.9□□□□□ -0.99
CHD3-201ENST00000330494 SAP25Q8TEE9 199 aa8.9□□□□□ -0.99
CHD3-201ENST00000330494 PHYHIPLQ96FC7 376 aa8.9□□□□□ -0.99
CHD3-201ENST00000330494 TP53BP1Q12888 1972 aaPredicted RBP8.9□□□□□ -0.99
CHD3-201ENST00000330494 TRIOBPQ9H2D6 2365 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 ADRA2AP08913 450 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 SNRPCP09234 159 aaKnown RBP8.89□□□□□ -0.99
CHD3-201ENST00000330494 CXCL3P19876 107 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 CCKARP32238 428 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 GPR137Q96N19 417 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 PRSS27Q9BQR3 290 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 GLRX2Q9NS18 164 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 SH2D7A6NKC9 451 aaPredicted RBP8.89□□□□□ -0.99
CHD3-201ENST00000330494 C16orf97H3BN30 126 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 GALR1P47211 349 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 ANXA10Q9UJ72 324 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 YTHDF2Q9Y5A9 579 aaKnown RBP8.89□□□□□ -0.99
CHD3-201ENST00000330494 RALGAPA1Q6GYQ0 2036 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 LRRC3CA6NJW4 275 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 OR4C45A6NMZ5 311 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 GP1BAP07359 652 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 SMIM6P0DI80 62 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 SMIM17P0DL12 118 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 ZNF154Q13106 437 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 FGF11Q92914 225 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 R3HDM4Q96D70 268 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 CBLN2Q8IUK8 224 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 MRGPRFQ96AM1 343 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 MS4A7Q9GZW8 240 aaPredicted RBP8.89□□□□□ -0.99
CHD3-201ENST00000330494 FBXL17Q9UF56 701 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 ZNF260Q3ZCT1 412 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 EAF1Q96JC9 268 aaPredicted RBP8.89□□□□□ -0.99
CHD3-201ENST00000330494 WDFY2Q96P53 400 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 AMMECR1Q9Y4X0 333 aaPredicted RBP8.89□□□□□ -0.99
CHD3-201ENST00000330494 V9GYH0 126 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 TSPAN2O60636 221 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 GALP22466 123 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 C1orf185Q5T7R7 199 aa8.89□□□□□ -0.99
CHD3-201ENST00000330494 HSBP1O75506 76 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms