RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ZCCHC4Q9H5U6 513 aa11.55□□□□□ -0.56
CTHRC1-201ENST00000330295 SCN3BQ9NY72 215 aa11.55□□□□□ -0.56
CTHRC1-201ENST00000330295 ZNF222Q9UK12 451 aa11.55□□□□□ -0.56
CTHRC1-201ENST00000330295 MYL12BO14950 172 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 MT-ND2P03891 347 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 HSPA13P48723 471 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 POU3F4P49335 361 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 TAS2R43P59537 309 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 PRR20EP86478 221 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 PRR20CP86479 221 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 PRR20DP86480 221 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 PRR20BP86481 221 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 PRR20AP86496 221 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 BPIFB6Q8NFQ5 453 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 OR4M1Q8NGD0 313 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 NDNFQ8TB73 568 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 GGHQ92820 318 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 PDCD1LG2Q9BQ51 273 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 PLCXD1Q9NUJ7 323 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 C19orf73Q9NVV2 129 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 OR14J1Q9UGF5 321 aa11.54□□□□□ -0.56
CTHRC1-201ENST00000330295 C17orf98A8MV24 154 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 E9PI62 339 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 M0QZK8 103 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 GNAO1P09471 354 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 DLX6P56179 175 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 SLC35B1P78383 322 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 FHL3Q13643 280 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 SRSF7Q16629 238 aaKnown RBP eCLIP11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 ZNF429Q86V71 674 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 CALHM1Q8IU99 346 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 PARP16Q8N5Y8 322 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 OR13C9Q8NGT0 318 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 EMG1Q92979 244 aaKnown RBP11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 SLAMF9Q96A28 289 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 ZNF488Q96MN9 340 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 RHOFQ9HBH0 211 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 PSORS1C1Q9UIG5 152 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 ERGIC3Q9Y282 383 aa11.53□□□□□ -0.56
CTHRC1-201ENST00000330295 SULT1B1O43704 296 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 RAB3AP20336 220 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 CNTFRP26992 372 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 BRS3P32247 399 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 ERVK11-1P61568 191 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 PPP3R1P63098 170 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 PDZK1IP1Q13113 114 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 CDK5R1Q15078 307 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 OR2G6Q5TZ20 316 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 AHSA2Q719I0 299 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 ASCC1Q8N9N2 400 aaKnown RBP11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 OR51A4Q8NGJ6 313 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 OR10AC1Q8NH08 325 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 HES4Q9HCC6 221 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 ISYNA1Q9NPH2 558 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 CKLFQ9UBR5 152 aa11.52□□□□□ -0.57
CTHRC1-201ENST00000330295 TNCP24821 2201 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 IGKV1-27A0A075B6S5 117 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 IGKV1-9A0A0C4DH69 117 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 A8MZ25 164 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 CCRL2O00421 344 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 OGG1O15527 345 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 INMTO95050 263 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 RPLP1P05386 114 aaKnown RBP11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 TMEM225BP0DP42 221 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 GTF2A1P52655 376 aaPredicted RBP11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 GDPD3Q7L5L3 318 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 SAXO1Q8IYX7 474 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 FAM58AQ8N1B3 248 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 CD177Q8N6Q3 437 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 FBLIM1Q8WUP2 373 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 THRSPQ92748 146 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 SMIM19Q96E16 107 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 GPER1Q99527 375 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 SEBOXQ9HB31 216 aaPredicted RBP11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 MTCH1Q9NZJ7 389 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 LINC00527Q9UJ94 153 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 TPRKBQ9Y3C4 175 aa11.51□□□□□ -0.57
CTHRC1-201ENST00000330295 SERPINE3A8MV23 424 aa11.5□□□□□ -0.57
CTHRC1-201ENST00000330295 SH2D1BO14796 132 aa11.5□□□□□ -0.57
CTHRC1-201ENST00000330295 CDX1P47902 265 aaPredicted RBP11.5□□□□□ -0.57
CTHRC1-201ENST00000330295 SOX2P48431 317 aa11.5□□□□□ -0.57
CTHRC1-201ENST00000330295 AQP4P55087 323 aa11.5□□□□□ -0.57
CTHRC1-201ENST00000330295 HAGHQ16775 308 aa11.5□□□□□ -0.57
CTHRC1-201ENST00000330295 SPIN3Q5JUX0 258 aa11.5□□□□□ -0.57
CTHRC1-201ENST00000330295 C6orf141Q5SZD1 244 aa11.5□□□□□ -0.57
CTHRC1-201ENST00000330295 TEX38Q6PEX7 206 aa11.5□□□□□ -0.57
CTHRC1-201ENST00000330295 BATF2Q8N1L9 274 aa11.5□□□□□ -0.57
CTHRC1-201ENST00000330295 DRAM1Q8N682 238 aa11.5□□□□□ -0.57
CTHRC1-201ENST00000330295 ST6GALNAC6Q969X2 333 aa11.5□□□□□ -0.57
CTHRC1-201ENST00000330295 CLEC2DQ9UHP7 191 aa11.5□□□□□ -0.57
CTHRC1-201ENST00000330295 PTGES3LE9PB15 166 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 DEDDO75618 318 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 HAND1O96004 215 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 RBP4P02753 201 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 TK1P04183 234 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 PRKACAP17612 351 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 GABRR1P24046 479 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 WNT4P56705 351 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 KISS1Q15726 138 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 YIF1BQ5BJH7 314 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms