RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 PILRBQ9UKJ0 227 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 DAPP1Q9UN19 280 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 VDAC3Q9Y277 283 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 MEGF11A6BM72 1044 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 LRRC3CA6NJW4 275 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 PROB1E7EW31 1015 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 TAX1BP3O14907 124 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 IGFBP3P17936 291 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-201ENST00000328923 IGFBP4P22692 258 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 GABRA2P47869 451 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 RAB9AP51151 201 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 EWSR1Q01844 656 aaKnown RBP eCLIP10.28□□□□□ -0.76
SHMT2-201ENST00000328923 UNC119Q13432 240 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 BSXQ3C1V8 233 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 TCF24Q7RTU0 167 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 ZAR1Q86SH2 424 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 LRRC75AQ8NAA5 344 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 ZC2HC1AQ96GY0 325 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 UHRF2Q96PU4 802 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 ATP6V0BQ99437 205 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 ATP5SQ99766 215 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 SMIM7Q9BQ49 75 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 TIMM29Q9BSF4 260 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 FAM103A1Q9BTL3 118 aaKnown RBP10.28□□□□□ -0.76
SHMT2-201ENST00000328923 OR51I2Q9H344 312 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 CISD1Q9NZ45 108 aaKnown RBP10.28□□□□□ -0.76
SHMT2-201ENST00000328923 IGHV2-26A0A0B4J1V2 119 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 TNFSF12O43508 249 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 B3GALT2O43825 422 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 ANOS1P23352 680 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 OMGP23515 440 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 IL3RAP26951 378 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 ADMP35318 185 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 CLDN17P56750 224 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 ZNF117Q03924 483 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 SLC17A1Q14916 467 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 VAX1Q5SQQ9 334 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 COX15Q7KZN9 410 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 BHLHA15Q7RTS1 189 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-201ENST00000328923 ABHD12BQ7Z5M8 362 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-201ENST00000328923 TMEM144Q7Z5S9 345 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 OR4N5Q8IXE1 308 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 C11orf40Q8WZ69 217 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 AMELYQ99218 206 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 LYRM4Q9HD34 91 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 NAT8Q9UHE5 227 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 DHDHQ9UQ10 334 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 TOX4O94842 621 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 HBE1P02100 147 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 ZNF10P21506 573 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-201ENST00000328923 RPL23P62829 140 aaKnown RBP10.27□□□□□ -0.77
SHMT2-201ENST00000328923 SRPXP78539 464 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 RUNX3Q13761 415 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 MSMO1Q15800 293 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 ZNF141Q15928 474 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 EXT1Q16394 746 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 PRICKLE4Q2TBC4 344 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 CENPVQ7Z7K6 275 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-201ENST00000328923 MRGPRGQ86SM5 289 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-201ENST00000328923 UBALD2Q8IYN6 164 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 FBXL14Q8N1E6 418 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 FAM222BQ8WU58 562 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 SCGB3A2Q96PL1 93 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 RBM24Q9BX46 236 aaKnown RBP10.27□□□□□ -0.77
SHMT2-201ENST00000328923 SAMD10Q9BYL1 202 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 ABI3Q9P2A4 366 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 PXMP4Q9Y6I8 212 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 ALPK2Q86TB3 2170 aa10.27□□□□□ -0.77
SHMT2-201ENST00000328923 H2BFMP0C1H6 154 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 ZNF93P35789 620 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-201ENST00000328923 NKX2-1P43699 371 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-201ENST00000328923 TLE1Q04724 770 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 MGAT2Q10469 447 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 ITPRIPL2Q3MIP1 535 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 TCF23Q7RTU1 214 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 LHFPL1Q86WI0 220 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 FER1L6-AS1Q8NA97 138 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 OR5H2Q8NGV7 314 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 TMEM171Q8WVE6 324 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 NUDT16L1Q9BRJ7 211 aaKnown RBP10.26□□□□□ -0.77
SHMT2-201ENST00000328923 PSG11Q9UQ72 335 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 B3GALT5Q9Y2C3 310 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 FAM24AA6NFZ4 105 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 VSTM5A8MXK1 200 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 LRRC10Q5BKY1 277 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 C1orf100Q5SVJ3 147 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 DPY19L4Q7Z388 723 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 ATOH7Q8N100 152 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 OR52M1Q8NGK5 317 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 OTOSQ8NHW6 89 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 ASB5Q8WWX0 329 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 TM4SF19Q96DZ7 209 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 SLC25A44Q96H78 314 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-201ENST00000328923 LMF2Q9BU23 707 aaKnown RBP10.26□□□□□ -0.77
SHMT2-201ENST00000328923 PLA2G2FQ9BZM2 168 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 WNT10AQ9GZT5 417 aa10.26□□□□□ -0.77
SHMT2-201ENST00000328923 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 A0A0U1RQK1 487 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 SERINC4A6NH21 518 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms