RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 HOXA1P49639 335 aaPredicted RBP13.8□□□□□ -0.2
SYNM-201ENST00000328642 P2RY4P51582 365 aa13.8□□□□□ -0.2
SYNM-201ENST00000328642 SOHLH1Q5JUK2 328 aa13.8□□□□□ -0.2
SYNM-201ENST00000328642 RIPPLY2Q5TAB7 128 aa13.8□□□□□ -0.2
SYNM-201ENST00000328642 ZCCHC24Q8N2G6 241 aaKnown RBP13.8□□□□□ -0.2
SYNM-201ENST00000328642 CCDC168Q8NDH2 2452 aa13.8□□□□□ -0.2
SYNM-201ENST00000328642 RAB18Q9NP72 206 aa13.8□□□□□ -0.2
SYNM-201ENST00000328642 PURGQ9UJV8 347 aaKnown RBP13.8□□□□□ -0.2
SYNM-201ENST00000328642 A0A1W2PPV4 95 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 ZNF724A8MTY0 619 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 RGS13O14921 159 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 ECI1P42126 302 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 ID4P47928 161 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 SLC25A53Q5H9E4 307 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 BHLHA15Q7RTS1 189 aaPredicted RBP13.79□□□□□ -0.2
SYNM-201ENST00000328642 LYG1Q8N1E2 194 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 SLC35G3Q8N808 338 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 LEAP2Q969E1 77 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 GMPPAQ96IJ6 420 aaPredicted RBP13.79□□□□□ -0.2
SYNM-201ENST00000328642 MPC1Q9Y5U8 109 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 EML6Q6ZMW3 1958 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 GPR37O15354 613 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 MPPED1O15442 326 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 JTBO76095 146 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 CRYABP02511 175 aaKnown RBP13.79□□□□□ -0.2
SYNM-201ENST00000328642 NTF4P34130 210 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 CLDN18P56856 261 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 SRPXP78539 464 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 HOXA4Q00056 320 aaPredicted RBP13.79□□□□□ -0.2
SYNM-201ENST00000328642 ZNF528Q3MIS6 628 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 SLC38A6Q8IZM9 456 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 ERGIC1Q969X5 290 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 SLC39A9Q9NUM3 307 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 ARFGEF3Q5TH69 2177 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 LRP5LA4QPB2 252 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 OR5B21A6NL26 309 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 H2AFB1P0C5Y9 115 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 LPAR6P43657 344 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 FOXO1Q12778 655 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 ADAM5Q6NVV9 412 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 SVBPQ8N300 66 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 OR5A2Q8NGI9 324 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 RXFP4Q8TDU9 374 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 ABHD14BQ96IU4 210 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 AKR1E2Q96JD6 320 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 PSENENQ9NZ42 101 aa13.79□□□□□ -0.2
SYNM-201ENST00000328642 NPIPB13A6NJU9 1138 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 NPIPB4C9JG80 1138 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 MFNGO00587 321 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 TMPRSS2O15393 492 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 TXNL1O43396 289 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 CHST1O43916 411 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 RAB11AP62491 216 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 MZT1Q08AG7 82 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 CEACAM21Q3KPI0 293 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 Q96M66 194 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 ZFYVE26Q68DK2 2539 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 CLEC18AA5D8T8 446 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 ATP6V1G2-DDX39BF2Z307 99 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 HAND1O96004 215 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 PMELP40967 661 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 KLF3P57682 345 aaPredicted RBP13.78□□□□□ -0.2
SYNM-201ENST00000328642 FAM27E3Q08E93 113 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 RNFT1Q5M7Z0 435 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 PRSS54Q6PEW0 395 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 CLEC18CQ8NCF0 446 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 RASL12Q9NYN1 266 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 AMDHD2Q9Y303 409 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 PRELID3BQ9Y3B1 194 aa13.78□□□□□ -0.2
SYNM-201ENST00000328642 TMEM30CPA0ZSE6 113 aa13.77□□□□□ -0.2
SYNM-201ENST00000328642 F8VVB4 439 aa13.77□□□□□ -0.2
SYNM-201ENST00000328642 F8VWA3 439 aa13.77□□□□□ -0.2
SYNM-201ENST00000328642 ST8SIA5O15466 376 aa13.77□□□□□ -0.2
SYNM-201ENST00000328642 CTSDP07339 412 aaPredicted RBP13.77□□□□□ -0.2
SYNM-201ENST00000328642 HGFACQ04756 655 aa13.77□□□□□ -0.2
SYNM-201ENST00000328642 ZNF266Q14584 549 aa13.77□□□□□ -0.2
SYNM-201ENST00000328642 ASPHD2Q6ICH7 369 aa13.77□□□□□ -0.2
SYNM-201ENST00000328642 BIVMQ86UB2 503 aa13.77□□□□□ -0.2
SYNM-201ENST00000328642 BPIFCQ8NFQ6 507 aa13.77□□□□□ -0.2
SYNM-201ENST00000328642 PINX1Q96BK5 328 aaKnown RBP13.77□□□□□ -0.2
SYNM-201ENST00000328642 ADGRG7Q96K78 797 aa13.77□□□□□ -0.2
SYNM-201ENST00000328642 J3QT63 122 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 PSG2P11465 335 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 ANOS1P23352 680 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 TNFAIP6P98066 277 aaPredicted RBP13.77□□□□□ -0.21
SYNM-201ENST00000328642 PEA15Q15121 130 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 MIDNQ504T8 468 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 CXorf66Q5JRM2 361 aaPredicted RBP13.77□□□□□ -0.21
SYNM-201ENST00000328642 OR52L2PQ8NGH6 319 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 PIPOXQ9P0Z9 390 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 MSGN1A6NI15 193 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 H0YL77 283 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 GALR2O43603 387 aaPredicted RBP13.77□□□□□ -0.21
SYNM-201ENST00000328642 ATG12O94817 140 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 SCAF4O95104 1147 aaKnown RBP13.77□□□□□ -0.21
SYNM-201ENST00000328642 FAM87AP0C7U9 286 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 APELAP0DMC3 54 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 FOXF2Q12947 444 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 MPPED2Q15777 294 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 CSRP2Q16527 193 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms