RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 RALGAPA1Q6GYQ0 2036 aa11.02□□□□□ -0.65
CCDC60-201ENST00000327554 CHD9Q3L8U1 2897 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 SCGB1D1O95968 90 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 RPL29P47914 159 aaKnown RBP11.01□□□□□ -0.65
CCDC60-201ENST00000327554 RPL23P62829 140 aaKnown RBP11.01□□□□□ -0.65
CCDC60-201ENST00000327554 SHHQ15465 462 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 CLEC12BQ2HXU8 276 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 BSXQ3C1V8 233 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 PIGYQ3MUY2 71 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 MRGPRGQ86SM5 289 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 NAT6Q93015 286 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 GPHA2Q96T91 129 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 RBKSQ9H477 322 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 SOHLH2Q9NX45 425 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 SPAG17Q6Q759 2223 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 IGHV5-51A0A0C4DH38 117 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 H7BYZ3 331 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 TP53I11O14683 189 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 OR2J2O76002 312 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 IFNA5P01569 189 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 OPN1LWP04000 364 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 CAPZBP47756 277 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 FBXW4P57775 412 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 MRPS34P82930 218 aaKnown RBP11.01□□□□□ -0.65
CCDC60-201ENST00000327554 C17orf67Q0P5P2 114 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 NSDHLQ15738 373 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 TMEM241Q24JQ0 296 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 OPN3Q9H1Y3 402 aaPredicted RBP11.01□□□□□ -0.65
CCDC60-201ENST00000327554 TAAR3PQ9P1P4 343 aa11.01□□□□□ -0.65
CCDC60-201ENST00000327554 A0A1W2PPQ1 181 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 HRASP01112 189 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 GFERP55789 205 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 HNRNPKP61978 463 aaKnown RBP eCLIP11□□□□□ -0.65
CCDC60-201ENST00000327554 RTP5Q14D33 572 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 ACOT6Q3I5F7 207 aaPredicted RBP11□□□□□ -0.65
CCDC60-201ENST00000327554 MRPL52Q86TS9 123 aaKnown RBP11□□□□□ -0.65
CCDC60-201ENST00000327554 PRSS58Q8IYP2 241 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 C10orf35Q96D05 121 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 OR5B12Q96R08 314 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 OR6C3Q9NZP0 311 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 NAGKQ9UJ70 344 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 FER1L5A0AVI2 2057 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 H3BP45 60 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 KBTBD11O94819 623 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 GNRH1P01148 92 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 TYMSP04818 313 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 VDAC1P21796 283 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 SUMO3P55854 103 aaPredicted RBP11□□□□□ -0.65
CCDC60-201ENST00000327554 TMEM267Q0VDI3 215 aaPredicted RBP11□□□□□ -0.65
CCDC60-201ENST00000327554 ACSF3Q4G176 576 aaPredicted RBP11□□□□□ -0.65
CCDC60-201ENST00000327554 SLC25A24Q6NUK1 477 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 ASCL4Q6XD76 172 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 ARL6IP6Q8N6S5 226 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 ADPRHL1Q8NDY3 354 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 REPIN1Q9BWE0 567 aaKnown RBP11□□□□□ -0.65
CCDC60-201ENST00000327554 FBRSQ9HAH7 460 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 PLSCR2Q9NRY7 297 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 SLC7A10Q9NS82 523 aa11□□□□□ -0.65
CCDC60-201ENST00000327554 IGKV1-12A0A0C4DH73 117 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 DUXBA0A1W2PPF3 345 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 LRRC3CA6NJW4 275 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 TNFSF12O43508 249 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 IGKV1D-12P01611 117 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 IRF2P14316 349 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 UCP1P25874 307 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 OTX1P32242 354 aaPredicted RBP10.99□□□□□ -0.65
CCDC60-201ENST00000327554 C1orf53Q5VUE5 145 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 POC1BQ8TC44 478 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 SPSB1Q96BD6 273 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 MRGPRX1Q96LB2 322 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 DIRC2Q96SL1 478 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 RPP25Q9BUL9 199 aaKnown RBP10.99□□□□□ -0.65
CCDC60-201ENST00000327554 F5P12259 2224 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 A0A1W2PNR3 127 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 HPRT1P00492 218 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 OR10J1P30954 320 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 MDH2P40926 338 aaKnown RBP10.99□□□□□ -0.65
CCDC60-201ENST00000327554 CNN1P51911 297 aaKnown RBP10.99□□□□□ -0.65
CCDC60-201ENST00000327554 ENDOGQ14249 297 aaKnown RBP10.99□□□□□ -0.65
CCDC60-201ENST00000327554 OR8B8Q15620 311 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 SNAI3Q3KNW1 292 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 ARSJQ5FYB0 599 aaPredicted RBP10.99□□□□□ -0.65
CCDC60-201ENST00000327554 ZNF705AQ6ZN79 300 aaPredicted RBP10.99□□□□□ -0.65
CCDC60-201ENST00000327554 ZNF818PQ6ZRF7 136 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 PSMG3Q9BT73 122 aaPredicted RBP10.99□□□□□ -0.65
CCDC60-201ENST00000327554 HS3ST3A1Q9Y663 406 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 REV3LO60673 3130 aa10.99□□□□□ -0.65
CCDC60-201ENST00000327554 YLPM1P49750 1951 aaKnown RBP10.98□□□□□ -0.65
CCDC60-201ENST00000327554 MAP1LC3B2A6NCE7 125 aa10.98□□□□□ -0.65
CCDC60-201ENST00000327554 H3BMH7 237 aa10.98□□□□□ -0.65
CCDC60-201ENST00000327554 IFNA1P01562 189 aa10.98□□□□□ -0.65
CCDC60-201ENST00000327554 WNT5AP41221 380 aa10.98□□□□□ -0.65
CCDC60-201ENST00000327554 ZNF92Q03936 586 aa10.98□□□□□ -0.65
CCDC60-201ENST00000327554 PDCD1Q15116 288 aa10.98□□□□□ -0.65
CCDC60-201ENST00000327554 SPIN3Q5JUX0 258 aa10.98□□□□□ -0.65
CCDC60-201ENST00000327554 GAPTQ8N292 157 aa10.98□□□□□ -0.65
CCDC60-201ENST00000327554 CISD2Q8N5K1 135 aaKnown RBP10.98□□□□□ -0.65
CCDC60-201ENST00000327554 OR2T10Q8NGZ9 312 aa10.98□□□□□ -0.65
CCDC60-201ENST00000327554 MAP1LC3BQ9GZQ8 125 aa10.98□□□□□ -0.65
CCDC60-201ENST00000327554 LPAR2Q9HBW0 351 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms