RNA–Protein interactions for RNA: ENST00000325599.12

SHQ1-201, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHQ1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-201ENST00000325599 WFDC1Q9HC57 220 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 PRRC2CQ9Y520 2896 aaKnown RBP14.05□□□□□ -0.16
SHQ1-201ENST00000325599 CAV2P51636 162 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 RPP30P78346 268 aaKnown RBP14.05□□□□□ -0.16
SHQ1-201ENST00000325599 GAMTQ14353 236 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 TMEM211Q6ICI0 200 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 DEFB123Q8N688 67 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 C15orf54Q8N8G6 183 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 A0A1W2PPH5 198 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 LNP1A1A4G5 178 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 H7C1Q1 480 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 PPYP01298 95 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 GLP1RP43220 463 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 BPIFB3P59826 476 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 HERV-K104P61576 105 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 EIF5AP63241 154 aaKnown RBP14.05□□□□□ -0.16
SHQ1-201ENST00000325599 EIF5AL1Q6IS14 154 aaKnown RBP14.05□□□□□ -0.16
SHQ1-201ENST00000325599 Q6ZRG5 221 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 NRIP2Q9BQI9 281 aa14.05□□□□□ -0.16
SHQ1-201ENST00000325599 JTBO76095 146 aa14.04□□□□□ -0.16
SHQ1-201ENST00000325599 ASCL1P50553 236 aa14.04□□□□□ -0.16
SHQ1-201ENST00000325599 IGFBP7Q16270 282 aa14.04□□□□□ -0.16
SHQ1-201ENST00000325599 SLC35G3Q8N808 338 aa14.04□□□□□ -0.16
SHQ1-201ENST00000325599 KDF1Q8NAX2 398 aaPredicted RBP14.04□□□□□ -0.16
SHQ1-201ENST00000325599 OR51B6Q9H340 312 aa14.04□□□□□ -0.16
SHQ1-201ENST00000325599 MTCH1Q9NZJ7 389 aa14.04□□□□□ -0.16
SHQ1-201ENST00000325599 SCTP09683 121 aa14.04□□□□□ -0.16
SHQ1-201ENST00000325599 OR8U9P0C7N5 309 aa14.04□□□□□ -0.16
SHQ1-201ENST00000325599 S100A2P29034 98 aa14.04□□□□□ -0.16
SHQ1-201ENST00000325599 BTNL8Q6UX41 500 aa14.04□□□□□ -0.16
SHQ1-201ENST00000325599 TMEM251Q8N6I4 163 aa14.04□□□□□ -0.16
SHQ1-201ENST00000325599 OR8U1Q8NH10 309 aa14.04□□□□□ -0.16
SHQ1-201ENST00000325599 ZPBPQ9BS86 351 aa14.04□□□□□ -0.16
SHQ1-201ENST00000325599 ZNF552Q9H707 407 aaPredicted RBP14.04□□□□□ -0.16
SHQ1-201ENST00000325599 RCC2Q9P258 522 aaKnown RBP14.04□□□□□ -0.16
SHQ1-201ENST00000325599 KMT2EQ8IZD2 1858 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 NUDT19A8MXV4 375 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 ZNF732B4DXR9 585 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 E5RGE8 158 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 RNASEK-C17orf49H0YIS7 233 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 LILRA1O75019 489 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 CD80P33681 288 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 NHLH2Q02577 135 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 DCAF10Q5QP82 559 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 FBXW12Q6X9E4 464 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 MRPL21Q7Z2W9 205 aaKnown RBP14.03□□□□□ -0.16
SHQ1-201ENST00000325599 LRTM2Q8N967 370 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 DDA1Q9BW61 102 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 LINC00470Q9BZP3 86 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 NSG2Q9Y328 171 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 LOC400499M0QZD8 3231 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 ARHGAP21Q5T5U3 1957 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 RPL36A-HNRNPH2H7BZ11 118 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 GAPDHP04406 335 aaKnown RBP14.03□□□□□ -0.16
SHQ1-201ENST00000325599 SNRPCP09234 159 aaKnown RBP14.03□□□□□ -0.16
SHQ1-201ENST00000325599 GNRHRP30968 328 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 RAB5CP51148 216 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 RAB1AP62820 205 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 OR8G1Q15617 311 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 PDZD11Q5EBL8 140 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 NUFIP2Q7Z417 695 aaKnown RBP14.03□□□□□ -0.16
SHQ1-201ENST00000325599 LGI3Q8N145 548 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 ZNF488Q96MN9 340 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 TECTBQ96PL2 329 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 SYT3Q9BQG1 590 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 PLEKHA2Q9HB19 425 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 B4GALT7Q9UBV7 327 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 IL17BQ9UHF5 180 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 R4GN57 208 aa14.03□□□□□ -0.16
SHQ1-201ENST00000325599 SYNGR1O43759 233 aa14.02□□□□□ -0.16
SHQ1-201ENST00000325599 SYNGR4O95473 234 aa14.02□□□□□ -0.16
SHQ1-201ENST00000325599 SNRNP70P08621 437 aaKnown RBP14.02□□□□□ -0.16
SHQ1-201ENST00000325599 FHITP49789 147 aa14.02□□□□□ -0.16
SHQ1-201ENST00000325599 NRN1LQ496H8 165 aa14.02□□□□□ -0.16
SHQ1-201ENST00000325599 UBAC2Q8NBM4 344 aa14.02□□□□□ -0.16
SHQ1-201ENST00000325599 C20orf24Q9BUV8 137 aa14.02□□□□□ -0.16
SHQ1-201ENST00000325599 EGLN1Q9GZT9 426 aa14.02□□□□□ -0.16
SHQ1-201ENST00000325599 MED19A0JLT2 244 aaPredicted RBP14.02□□□□□ -0.17
SHQ1-201ENST00000325599 MPPED1O15442 326 aa14.02□□□□□ -0.17
SHQ1-201ENST00000325599 SOX15O60248 233 aa14.02□□□□□ -0.17
SHQ1-201ENST00000325599 MT-ND4LP03901 98 aa14.02□□□□□ -0.17
SHQ1-201ENST00000325599 SFTA3P0C7M3 94 aa14.02□□□□□ -0.17
SHQ1-201ENST00000325599 UCP3P55916 312 aa14.02□□□□□ -0.17
SHQ1-201ENST00000325599 FAM24BQ8N5W8 94 aa14.02□□□□□ -0.17
SHQ1-201ENST00000325599 SUMF1Q8NBK3 374 aa14.02□□□□□ -0.17
SHQ1-201ENST00000325599 OR10D4PQ8NGN7 298 aa14.02□□□□□ -0.17
SHQ1-201ENST00000325599 SECTM1Q8WVN6 248 aa14.02□□□□□ -0.17
SHQ1-201ENST00000325599 C3orf85A0A1B0GTC6 90 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 IFITM10A6NMD0 228 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 C1QL1O75973 258 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 PLGLB1Q02325 96 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 SPIN3Q5JUX0 258 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 VASH2Q86V25 355 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 MRPL37Q9BZE1 423 aaKnown RBP14.01□□□□□ -0.17
SHQ1-201ENST00000325599 SH3BGRL3Q9H299 93 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 RCL1Q9Y2P8 373 aaKnown RBP14.01□□□□□ -0.17
SHQ1-201ENST00000325599 NKX2-6A6NCS4 301 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 NME2P1O60361 137 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 HERPUD1Q15011 391 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 CEACAM21Q3KPI0 293 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms