RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 RTL6Q6ICC9 239 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 ZNF574Q6ZN55 896 aaPredicted RBP13.31□□□□□ -0.28
VARS2-201ENST00000321897 KCNK17Q96T54 332 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 PAM16Q9Y3D7 125 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 USF3Q68DE3 2245 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 HSPB2A8KAH6 182 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 J3QRE1 110 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 MGST1P10620 155 aaKnown RBP13.31□□□□□ -0.28
VARS2-201ENST00000321897 OR1C1Q15619 314 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 HSPB2Q16082 182 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 ARHGEF39Q8N4T4 335 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 PECRQ9BY49 303 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 LPAR5Q9H1C0 372 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 BPTFQ12830 3046 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 A0A1B0GTQ1 180 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 M0R143 59 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 PTBP3O95758 552 aaKnown RBP13.3□□□□□ -0.28
VARS2-201ENST00000321897 TRGC1P0CF51 173 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 DYNLT3P51808 116 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 OR5I1Q13606 314 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 SNAI3Q3KNW1 292 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 NANOS1Q8WY41 292 aaKnown RBP13.3□□□□□ -0.28
VARS2-201ENST00000321897 PP6455Q8WZ26 134 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 SLC25A22Q9H936 323 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 SLC2A8Q9NY64 477 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 DEFB108AA8MXU0 73 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 MAGEA5P43359 124 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 WDR74Q6RFH5 385 aaPredicted RBP13.3□□□□□ -0.28
VARS2-201ENST00000321897 OR10J5Q8NHC4 309 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 FAM117AQ9C073 453 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 PLEKHA3Q9HB20 300 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 GPR132Q9UNW8 380 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 POMT1Q9Y6A1 747 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 TRBV5-7A0A0A0MS05 114 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.3□□□□□ -0.283e-7■■■□□ 17
VARS2-201ENST00000321897 ZNF519Q8TB69 540 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 TRIB1Q96RU8 372 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 ZDHHC11Q9H8X9 412 aa13.3□□□□□ -0.28
VARS2-201ENST00000321897 UBE2L5PA0A1B0GUS4 154 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 MPLP40238 635 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 SLC10A1Q14973 349 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 IQCJQ1A5X6 159 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 NAA60Q9H7X0 242 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 PLEKHF2Q9H8W4 249 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 SERPINE3A8MV23 424 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 KRASP01116 189 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 RAC1P63000 192 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 PDLIM3Q53GG5 364 aaPredicted RBP13.29□□□□□ -0.28
VARS2-201ENST00000321897 HOGA1Q86XE5 327 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 OR2Y1Q8NGV0 311 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 G6PC2Q9NQR9 355 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 COLQQ9Y215 455 aaPredicted RBP13.29□□□□□ -0.28
VARS2-201ENST00000321897 C3orf80F5H4A9 247 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 GALR1P47211 349 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 EWSR1Q01844 656 aaKnown RBP eCLIP13.29□□□□□ -0.28
VARS2-201ENST00000321897 KHDC3LQ587J8 217 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 LINC00114Q6XXX2 140 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 ERRFI1Q9UJM3 462 aaPredicted RBP13.29□□□□□ -0.28
VARS2-201ENST00000321897 HEATR1Q9H583 2144 aaKnown RBP13.29□□□□□ -0.28
VARS2-201ENST00000321897 NKX2-6A6NCS4 301 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 RNF126Q9BV68 326 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 SIRT7Q9NRC8 400 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 TCFL5Q9UL49 500 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 HS3ST3B1Q9Y662 390 aa13.29□□□□□ -0.28
VARS2-201ENST00000321897 SNCAP37840 140 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 ZNF92Q03936 586 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 UNC119Q13432 240 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 ZNF124Q15973 351 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 SPNS3Q6ZMD2 512 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 CACFD1Q9UGQ2 172 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 TCF21O43680 179 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 TRAF3IP2O43734 574 aaPredicted RBP13.28□□□□□ -0.28
VARS2-201ENST00000321897 ZNF708P17019 499 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 THBS4P35443 961 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 ECI1P42126 302 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 IGLV3-21P80748 117 aaPredicted RBP13.28□□□□□ -0.28
VARS2-201ENST00000321897 ZNF90Q03938 601 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 PNLIPRP3Q17RR3 467 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 IZUMO4Q1ZYL8 232 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 BIVMQ86UB2 503 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 DMBX1Q8NFW5 382 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 TMEM100Q9NV29 134 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 IGHV3-43A0A0B4J1X8 118 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 IGHV3-43DP0DP04 118 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 SELENOVP59797 346 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 SRPXP78539 464 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 ZNF816Q0VGE8 651 aaPredicted RBP13.28□□□□□ -0.28
VARS2-201ENST00000321897 ATP1A1-AS1Q5TC04 95 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 SSX7Q7RTT5 188 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 ZNF665Q9H7R5 613 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 ZNF319Q9P2F9 582 aa13.28□□□□□ -0.28
VARS2-201ENST00000321897 C5orf52A6NGY3 159 aa13.27□□□□□ -0.28
VARS2-201ENST00000321897 AQP7P3A6NL99 342 aa13.27□□□□□ -0.28
VARS2-201ENST00000321897 E9PQ18 207 aa13.27□□□□□ -0.28
VARS2-201ENST00000321897 MBPP02686 304 aaPredicted RBP13.27□□□□□ -0.28
VARS2-201ENST00000321897 PTGER4P35408 488 aa13.27□□□□□ -0.28
VARS2-201ENST00000321897 ROM1Q03395 351 aa13.27□□□□□ -0.28
VARS2-201ENST00000321897 LRRC75AQ8NAA5 344 aa13.27□□□□□ -0.28
VARS2-201ENST00000321897 CT55Q8WUE5 264 aa13.27□□□□□ -0.28
VARS2-201ENST00000321897 ENY2Q9NPA8 101 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms