RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 OR10D4PQ8NGN7 298 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 RAB39BQ96DA2 213 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 PIK3IP1Q96FE7 263 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 LRFN3Q9BTN0 628 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 SONP18583 2426 aaKnown RBP14.35□□□□□ -0.11
CLIP4-201ENST00000320081 ZNF320A2RRD8 509 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 G6PC2Q9NQR9 355 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 LPAR3Q9UBY5 353 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 OR5H1A6NKK0 313 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 NPIPB9F8W1W9 429 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 SYNGR1O43759 233 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 CTSDP07339 412 aaPredicted RBP14.35□□□□□ -0.11
CLIP4-201ENST00000320081 OR10J4P0C629 311 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 FABP4P15090 132 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 UNQ9370/PRO34162Q6UXP9 181 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 LIAT1Q6ZQX7 453 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 TRBV5-7A0A0A0MS05 114 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 ZIC3O60481 467 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 CYTIPO60759 359 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 COX5AP20674 150 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 SLC38A11Q08AI6 406 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 HABP2Q14520 560 aaPredicted RBP14.35□□□□□ -0.11
CLIP4-201ENST00000320081 CXorf66Q5JRM2 361 aaPredicted RBP14.35□□□□□ -0.11
CLIP4-201ENST00000320081 ZNF519Q8TB69 540 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 TMEM127O75204 238 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 DVL1P1P54792 670 aaPredicted RBP14.34□□□□□ -0.11
CLIP4-201ENST00000320081 HSD17B13Q7Z5P4 300 aaPredicted RBP14.34□□□□□ -0.11
CLIP4-201ENST00000320081 ZNF485Q8NCK3 441 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 PRO1933Q9H354 126 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 PCNX2A6NKB5 2137 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 LOC285556D6RIA3 1793 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 IGHV3OR15-7A0A075B7D8 119 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 MAP1LC3B2A6NCE7 125 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 FFAR4Q5NUL3 377 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 PMS2CLQ68D20 193 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 SSMEM1Q8WWF3 244 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 MAP1LC3BQ9GZQ8 125 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 RAB9BQ9NP90 201 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 FAM206AQ9NX38 181 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 TMEM30CPA0ZSE6 113 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 C7orf77A4D0Y5 90 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 CELA3AP09093 270 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 P2RY4P51582 365 aa14.34□□□□□ -0.11
CLIP4-201ENST00000320081 PUSL1Q8N0Z8 303 aaKnown RBP14.34□□□□□ -0.11
CLIP4-201ENST00000320081 MSGN1A6NI15 193 aa14.33□□□□□ -0.11
CLIP4-201ENST00000320081 CRYBA1P05813 215 aa14.33□□□□□ -0.11
CLIP4-201ENST00000320081 PSG2P11465 335 aa14.33□□□□□ -0.11
CLIP4-201ENST00000320081 STUMQ69YW2 141 aa14.33□□□□□ -0.11
CLIP4-201ENST00000320081 MRPS24Q96EL2 167 aaKnown RBP14.33□□□□□ -0.11
CLIP4-201ENST00000320081 TECTBQ96PL2 329 aa14.33□□□□□ -0.11
CLIP4-201ENST00000320081 ACTR3CQ9C0K3 210 aaPredicted RBP14.33□□□□□ -0.11
CLIP4-201ENST00000320081 TLNRD1Q9H1K6 362 aa14.33□□□□□ -0.11
CLIP4-201ENST00000320081 PTPRDP23468 1912 aa14.33□□□□□ -0.11
CLIP4-201ENST00000320081 A0A0G2JMZ2 1700 aa14.33□□□□□ -0.11
CLIP4-201ENST00000320081 LRRC37A2A6NM11 1700 aa14.33□□□□□ -0.11
CLIP4-201ENST00000320081 MYLKQ15746 1914 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 NKX2-8O15522 239 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 UNC119Q13432 240 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 TRA2AQ13595 282 aaKnown RBP eCLIP14.33□□□□□ -0.12
CLIP4-201ENST00000320081 C9orf152Q5JTZ5 239 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 MDP1Q86V88 176 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 OR2M7Q8NG81 312 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 FLVCR1-AS1Q8TAF5 88 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 SLC25A40Q8TBP6 338 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 SRXN1Q9BYN0 137 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 SLC35B3Q9H1N7 401 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 C5orf66Q9H5L9 145 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 SCN8AQ9UQD0 1980 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 PRRC2CQ9Y520 2896 aaKnown RBP14.33□□□□□ -0.12
CLIP4-201ENST00000320081 TRAV17A0A0B4J275 112 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 TUBAL3A6NHL2 446 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 LRRC30A6NM36 301 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 TOX3O15405 576 aaPredicted RBP14.33□□□□□ -0.12
CLIP4-201ENST00000320081 MST1P26927 711 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 PPP1CCP36873 323 aaKnown RBP14.33□□□□□ -0.12
CLIP4-201ENST00000320081 GAS1P54826 345 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 ZNF66Q6ZN08 573 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 IFT22Q9H7X7 185 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 PRSS50Q9UI38 385 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 RALGAPA2Q2PPJ7 1873 aa14.33□□□□□ -0.12
CLIP4-201ENST00000320081 GALR2O43603 387 aaPredicted RBP14.32□□□□□ -0.12
CLIP4-201ENST00000320081 FCGR3AP08637 254 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 MUC1P15941 1255 aaPredicted RBP14.32□□□□□ -0.12
CLIP4-201ENST00000320081 G6PCP35575 357 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 A0A1W2PNV4 684 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 ZNF17P17021 662 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 GLRX5Q86SX6 157 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 TMEM251Q8N6I4 163 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 SAP25Q8TEE9 199 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 RSG1Q9BU20 258 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 POMT1Q9Y6A1 747 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 APOA2P02652 100 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 ZNF658BQ4V348 819 aaPredicted RBP14.32□□□□□ -0.12
CLIP4-201ENST00000320081 ZNF561Q8N587 486 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 HSF4Q9ULV5 492 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 MMP9P14780 707 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 ATP6V0CP27449 155 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 BTCP35070 178 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 ERVS71-1P61550 626 aa14.32□□□□□ -0.12
CLIP4-201ENST00000320081 IGFBP7Q16270 282 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms