RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 RAB39BQ96DA2 213 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 HDHD3Q9BSH5 251 aaPredicted RBP11.29□□□□□ -0.6
PRPF18-201ENST00000320054 THAP7Q9BT49 309 aaPredicted RBP11.29□□□□□ -0.6
PRPF18-201ENST00000320054 CHMP1AQ9HD42 196 aaPredicted RBP11.29□□□□□ -0.6
PRPF18-201ENST00000320054 ABCA2Q9BZC7 2435 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 J3QRK9 145 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 NDUFB7P17568 137 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 NAT1P18440 290 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 RCVRNP35243 200 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 GLIPR1P48060 266 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 LMO4P61968 165 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 Q5PR19 223 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 WDR25Q64LD2 544 aaPredicted RBP11.28□□□□□ -0.6
PRPF18-201ENST00000320054 HOGA1Q86XE5 327 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 BORCS5Q969J3 196 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 TRIM63Q969Q1 353 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 FOXC2Q99958 501 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 Q9N2K0 584 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 IFT46Q9NQC8 304 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 MBNL3Q9NUK0 354 aaKnown RBP11.28□□□□□ -0.6
PRPF18-201ENST00000320054 LPAR3Q9UBY5 353 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 CLN8Q9UBY8 286 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 ZNF107Q9UII5 783 aaPredicted RBP11.28□□□□□ -0.6
PRPF18-201ENST00000320054 KIF25Q9UIL4 384 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 MGAT4AQ9UM21 535 aa11.28□□□□□ -0.6
PRPF18-201ENST00000320054 CR1P17927 2039 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 MEIKINA0A087WXM9 373 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 TRBV23-1A0A0A0MS06 115 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 ODAMA1E959 279 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 ORC5O43913 435 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 ECDO95905 644 aaPredicted RBP11.27□□□□□ -0.61
PRPF18-201ENST00000320054 IL7P13232 177 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 EDDM3BP56851 147 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 EDDM3AQ14507 147 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 BAK1Q16611 211 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 CR1LQ2VPA4 569 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 RNASE12Q5GAN4 147 aaKnown RBP11.27□□□□□ -0.61
PRPF18-201ENST00000320054 TRAT1Q6PIZ9 186 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 Q6ZPA2 131 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 ZNF554Q86TJ5 538 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 KRTAP1-3Q8IUG1 177 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 FGFRL1Q8N441 504 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 OR4K15Q8NH41 348 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 CORO2AQ92828 525 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 NARFLQ9H6Q4 476 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 TAS2R8Q9NYW2 309 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 OR6C3Q9NZP0 311 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 KLK11Q9UBX7 282 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 TRAPPC2LQ9UL33 140 aa11.27□□□□□ -0.61
PRPF18-201ENST00000320054 IGHV4-61A0A0C4DH41 118 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 hADV38S2A0JD32 116 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 MEIS3P1A6NDR6 274 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 A8MXK9 166 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 LANCL1O43813 399 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 UPK1BO75841 260 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 HEXAP06865 529 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 CSF1P09603 554 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 GSTT2BP0CG30 244 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 GZMHP20718 246 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 GDNFP39905 211 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 GNB2P62879 340 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 ESCO2Q56NI9 601 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 C6orf183Q5T699 404 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 CD276Q5ZPR3 534 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 TRIQKQ629K1 86 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 GVQW1Q8N7I0 195 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 TMEM229BQ8NBD8 167 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 BEST4Q8NFU0 473 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 C8orf46Q8TAG6 207 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 DEDD2Q8WXF8 326 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 DMRTB1Q96MA1 342 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 DCTN5Q9BTE1 182 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 ST6GALNAC5Q9BVH7 336 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 SSBP3Q9BWW4 388 aaPredicted RBP11.26□□□□□ -0.61
PRPF18-201ENST00000320054 ZNF286AQ9HBT8 521 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 PALMDQ9NP74 551 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 OPN4Q9UHM6 478 aa11.26□□□□□ -0.61
PRPF18-201ENST00000320054 ZNF230Q9UIE0 474 aaPredicted RBP11.26□□□□□ -0.61
PRPF18-201ENST00000320054 UBE2J1Q9Y385 318 aaPredicted RBP11.26□□□□□ -0.61
PRPF18-201ENST00000320054 CCDC168Q8NDH2 2452 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 ARHGAP32A7KAX9 2087 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 A0A096LNT2 108 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 KIR2DS1A0A191URI9 304 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 ANKRD20A5PA0PJZ0 165 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 TRDCB7Z8K6 153 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 RCC1P18754 421 aaPredicted RBP11.25□□□□□ -0.61
PRPF18-201ENST00000320054 TBPP20226 339 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 USF1P22415 310 aaPredicted RBP11.25□□□□□ -0.61
PRPF18-201ENST00000320054 KIR2DS4P43632 304 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 SEC61A1P61619 476 aaKnown RBP11.25□□□□□ -0.61
PRPF18-201ENST00000320054 RPL31P62899 125 aaKnown RBP11.25□□□□□ -0.61
PRPF18-201ENST00000320054 KIR2DS1Q14954 304 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 HMGN3Q15651 99 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 LYSMD2Q8IV50 215 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 TPRX1Q8N7U7 411 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 ZNF565Q8N9K5 539 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 OR13A1Q8NGR1 328 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 SETD6Q8TBK2 473 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 CCDC107Q8WV48 283 aa11.25□□□□□ -0.61
PRPF18-201ENST00000320054 H1FXQ92522 213 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms