RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ZC4H2Q9NQZ6 224 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 TMEM100Q9NV29 134 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 LSM5Q9Y4Y9 91 aaKnown RBP6.43□□□□□ -1.38
IFT88-201ENST00000319980 IGKV1D-13A0A0B4J2D9 117 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 C3orf85A0A1B0GTC6 90 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 MBD3L4A6NDZ8 208 aaPredicted RBP6.42□□□□□ -1.38
IFT88-201ENST00000319980 MBD3L3A6NE82 208 aaPredicted RBP6.42□□□□□ -1.38
IFT88-201ENST00000319980 MFSD2BA6NFX1 497 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 MBD3L5A6NJ08 208 aaPredicted RBP6.42□□□□□ -1.38
IFT88-201ENST00000319980 FBXO24O75426 580 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 OR2H2O95918 312 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 IGKV1-13P0DP09 117 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 LYL1P12980 280 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 HOXA4Q00056 320 aaPredicted RBP6.42□□□□□ -1.38
IFT88-201ENST00000319980 P2RY6Q15077 328 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 PAN3Q58A45 887 aaKnown RBP6.42□□□□□ -1.38
IFT88-201ENST00000319980 ZNF818PQ6ZRF7 136 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 ZNF826PQ6ZT77 177 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 LGI3Q8N145 548 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 GAPTQ8N292 157 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 MBD3L2Q8NHZ7 208 aaPredicted RBP6.42□□□□□ -1.38
IFT88-201ENST00000319980 LHFPL5Q8TAF8 219 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 GTF3AQ92664 365 aaKnown RBP6.42□□□□□ -1.38
IFT88-201ENST00000319980 PHYHIPLQ96FC7 376 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 RHOVQ96L33 236 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 CLUHP3Q96NS8 147 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 AQP10Q96PS8 301 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 REG4Q9BYZ8 158 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 SLC5A7Q9GZV3 580 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 MSL2Q9HCI7 577 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 OR2S2Q9NQN1 319 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 INTS1Q8N201 2190 aaKnown RBP6.42□□□□□ -1.38
IFT88-201ENST00000319980 ACACAQ13085 2346 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 OR5H1A6NKK0 313 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 HSD17B6O14756 317 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 MLNRO43193 412 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 TIMM8AO60220 97 aaPredicted RBP6.42□□□□□ -1.38
IFT88-201ENST00000319980 CTXN2P0C2S0 81 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 PGA5P0DJD9 388 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 TPT1P13693 172 aaKnown RBP6.42□□□□□ -1.38
IFT88-201ENST00000319980 ERVK11-1P61568 191 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 SMCO1Q147U7 214 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 Q6P435 159 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 BEND4Q6ZU67 534 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 BHLHA15Q7RTS1 189 aaPredicted RBP6.42□□□□□ -1.38
IFT88-201ENST00000319980 TBC1D26Q86UD7 250 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 BAP18Q8IXM2 172 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 Q8IYB0 196 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 OR8G5Q8NG78 346 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 KIRREL1Q96J84 757 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 NRIP2Q9BQI9 281 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 CCL28Q9NRJ3 127 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 OR14J1Q9UGF5 321 aa6.42□□□□□ -1.38
IFT88-201ENST00000319980 PURGQ9UJV8 347 aaKnown RBP6.42□□□□□ -1.38
IFT88-201ENST00000319980 ANKRD11Q6UB99 2663 aaPredicted RBP6.42□□□□□ -1.38
IFT88-201ENST00000319980 IGHV1-18A0A0C4DH31 117 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 A6NLC8 198 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 K7EPK0 472 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 LGALS8O00214 317 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 TNFSF12O43508 249 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 DEDDO75618 318 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 EIF2S3P41091 472 aaKnown RBP6.41□□□□□ -1.38
IFT88-201ENST00000319980 KCNJ3P48549 501 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 TMEM268Q5VZI3 342 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 PCSK4Q6UW60 755 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 FAM71E2Q8N5Q1 922 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 SLC35G3Q8N808 338 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 LRTM2Q8N967 370 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 OR52M1Q8NGK5 317 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 OR10J5Q8NHC4 309 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 ANGPTL6Q8NI99 470 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 UBALD1Q8TB05 177 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 BOD1Q96IK1 185 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 C18orf12Q96KH6 178 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 BCL2L14Q9BZR8 327 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 SHARPINQ9H0F6 387 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 CYTL1Q9NRR1 136 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 UFSP2Q9NUQ7 469 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 MED9Q9NWA0 146 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 DNAJB11Q9UBS4 358 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 TUBD1Q9UJT1 453 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 UBE2J1Q9Y385 318 aaPredicted RBP6.41□□□□□ -1.38
IFT88-201ENST00000319980 FAM215AQ9Y5M1 114 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 PIEZO2Q9H5I5 2752 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 CEP295Q9C0D2 2601 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 GTF3C1Q12789 2109 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 IGHV2OR16-5A0A0B4J2B6 119 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 GPR31O00270 319 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 SLC33A1O00400 549 aaPredicted RBP6.41□□□□□ -1.38
IFT88-201ENST00000319980 SH2D1BO14796 132 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 TUSC2O75896 110 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 IGLV1-44P01699 117 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 MBPP02686 304 aaPredicted RBP6.41□□□□□ -1.38
IFT88-201ENST00000319980 PF4P02776 101 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 GCH1P30793 250 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 CEBPDP49716 269 aaPredicted RBP6.41□□□□□ -1.38
IFT88-201ENST00000319980 BOLLQ8N9W6 283 aaKnown RBP6.41□□□□□ -1.38
IFT88-201ENST00000319980 PLPPR1Q8TBJ4 325 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 LRRC20Q8TCA0 184 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 TMED6Q8WW62 240 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms