RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 OR2F1Q13607 317 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 COTL1Q14019 142 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 C11orf87Q6NUJ2 197 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 OR10X1Q8NGY0 326 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 FAM213BQ8TBF2 198 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 OR2V2Q96R30 315 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 NAA60Q9H7X0 242 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 IFT22Q9H7X7 185 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 GP6Q9HCN6 339 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 ASCL3Q9NQ33 180 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 A0A1W2PNU3 283 aaPredicted RBP7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 SHOXO15266 292 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 DEFA4P12838 97 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 HOXA1P49639 335 aaPredicted RBP7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 IGFBP7Q16270 282 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 PDLIM3Q53GG5 364 aaPredicted RBP7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 PLAC9Q5JTB6 97 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 GGNBP1Q5YKI7 109 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 MOB1BQ7L9L4 216 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 SLC36A1Q7Z2H8 476 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 SPICQ8N5J4 248 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 ANGPTL6Q8NI99 470 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 ZCCHC14Q8WYQ9 949 aaKnown RBP7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 Q96M66 194 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 ZNF75AQ96N20 296 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 LIN7CQ9NUP9 197 aaKnown RBP7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 PRUNE2Q8WUY3 3088 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 CSPG4Q6UVK1 2322 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 LOC390937A0A1W2PQ73 354 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 F8W036 122 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 RPL36A-HNRNPH2H7BZ11 118 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 NDUFB3O43676 98 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 HOXD4P09016 255 aaPredicted RBP7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 NKX6-1P78426 367 aaPredicted RBP7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 BLOC1S1P78537 153 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 GLRX5Q86SX6 157 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 PIP4P1Q86T03 277 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 SLC25A42Q86VD7 318 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 WDFY1Q8IWB7 410 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 ITLN1Q8WWA0 313 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 GPHA2Q96T91 129 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 OR2D2Q9H210 308 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 SLC2A9Q9NRM0 540 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 V9GYS6 101 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 C3orf85A0A1B0GTC6 90 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 CST7O76096 145 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 YIF1AO95070 293 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 SCTP09683 121 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 RCC1P18754 421 aaPredicted RBP7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 DTYMKP23919 212 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 PMELP40967 661 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 RPS16P62249 146 aaKnown RBP7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 HFEQ30201 348 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 DTX1Q86Y01 620 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 GAPTQ8N292 157 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 OR5M8Q8NGP6 311 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 POM121L2Q96KW2 1035 aa7.99□□□□□ -1.13
TMEM39A-201ENST00000319172 TLN1Q9Y490 2541 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 IGKV3D-15A0A087WSY6 115 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 NUPL2O15504 423 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 MT-CO2P00403 227 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 CTSDP07339 412 aaPredicted RBP7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 ATF4P18848 351 aaPredicted RBP7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 RNF144BQ7Z419 303 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 LYG1Q8N1E2 194 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 OR8G5Q8NG78 346 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 ZDHHC16Q969W1 377 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 PIK3IP1Q96FE7 263 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 ADGRG7Q96K78 797 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 GPR137Q96N19 417 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 S1PR3Q99500 378 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 REPIN1Q9BWE0 567 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 C1QTNF5Q9BXJ0 243 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 A0A0C4DFX4 3053 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 UNC80Q8N2C7 3258 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 RHBDL1O75783 438 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 MPC2O95563 127 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 APOA2P02652 100 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 TUBG1P23258 451 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 CD80P33681 288 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 BTNL3Q6UXE8 466 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 SFXN3Q9BWM7 321 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 HIPK2Q9H2X6 1198 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 RNF122Q9H9V4 155 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 RNF7Q9UBF6 113 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 OPN4Q9UHM6 478 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 ZNF107Q9UII5 783 aaPredicted RBP7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 ETV2O00321 342 aaPredicted RBP7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 OR2H2O95918 312 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 MDH2P40926 338 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 TMEM50BP56557 158 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 AKR1C1Q04828 323 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 LRRC10Q5BKY1 277 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 DCAF12L2Q5VW00 463 aa7.98□□□□□ -1.13
TMEM39A-201ENST00000319172 FREM1Q5H8C1 2179 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 SMPD2O60906 423 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 WT1P19544 449 aaPredicted RBP7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 HBG1P69891 147 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 HBG2P69892 147 aa7.97□□□□□ -1.13
TMEM39A-201ENST00000319172 RPP30P78346 268 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms