RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 CPT1CQ8TCG5 803 aa8.15□□□□□ -1.11
CAPN3-201ENST00000318023 MRGPRDQ8TDS7 321 aa8.15□□□□□ -1.11
CAPN3-201ENST00000318023 SNRNP40Q96DI7 357 aaKnown RBP8.15□□□□□ -1.11
CAPN3-201ENST00000318023 ZNF2Q9BSG1 426 aaPredicted RBP8.15□□□□□ -1.11
CAPN3-201ENST00000318023 FBXO34Q9NWN3 711 aa8.15□□□□□ -1.11
CAPN3-201ENST00000318023 BORCS7-ASMTA0A0B4J1R7 106 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 TRDCB7Z8K6 153 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 LYPD3O95274 346 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 CT62P0C5K7 136 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 OR5G3P0C626 314 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 MPV17LQ2QL34 196 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 NUP54Q7Z3B4 507 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 LFNGQ8NES3 379 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 OR6N2Q8NGY6 317 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 AQP3Q92482 292 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 IMMP1LQ96LU5 166 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 SRA1Q9HD15 236 aaKnown RBP8.14□□□□□ -1.11
CAPN3-201ENST00000318023 SEPSECSQ9HD40 501 aaKnown RBP8.14□□□□□ -1.11
CAPN3-201ENST00000318023 K7EP13 123 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 K7N7A8 449 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 DEDDO75618 318 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 ABHD16AO95870 558 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 OR10J1P30954 320 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 KLRB1Q12918 225 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 FOXF1Q12946 379 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 IL15RAQ13261 267 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 DPY19L4Q7Z388 723 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 SLC24A4Q8NFF2 622 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 OR56A1Q8NGH5 318 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 PTPMT1Q8WUK0 201 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-201ENST00000318023 CIB3Q96Q77 187 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-201ENST00000318023 ALKBH4Q9NXW9 302 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 LRFN1Q9P244 771 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 MEMO1Q9Y316 297 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 PKDREJQ9NTG1 2253 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 SDCBPO00560 298 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-201ENST00000318023 TRMT12Q53H54 448 aaKnown RBP8.14□□□□□ -1.11
CAPN3-201ENST00000318023 FAM166AQ6J272 317 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 SPSB3Q6PJ21 355 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 MS4A10Q96PG2 267 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 AMELYQ99218 206 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 CSTL1Q9H114 145 aa8.14□□□□□ -1.11
CAPN3-201ENST00000318023 POLQO75417 2590 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 A0A0A6YYD5 115 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 A0A0U1RQV5 110 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 A0A1W2PN81 502 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 A8MVM7 634 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 TBX19O60806 448 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 GNLYP22749 145 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 CHRNA7P36544 502 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 OR3A2P47893 321 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 P2RY1P47900 373 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 ENDOGQ14249 297 aaKnown RBP8.13□□□□□ -1.11
CAPN3-201ENST00000318023 OR1C1Q15619 314 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 CHRFAM7AQ494W8 412 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 LINC01590Q5TEZ4 76 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 OR14L1PQ8NHC6 308 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 WDR76Q9H967 626 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 AURKAIP1Q9NWT8 199 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-201ENST00000318023 AK3Q9UIJ7 227 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 STRAPQ9Y3F4 350 aaKnown RBP8.13□□□□□ -1.11
CAPN3-201ENST00000318023 RNF115Q9Y4L5 304 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 CLDN16Q9Y5I7 305 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 TRBV24-1A0A075B6N3 115 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 TRAV34A0A0B4J273 112 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 A0A1B0GU03 582 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 A1L4Q6 167 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 TMEM212A6NML5 194 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 FAM166BA8MTA8 275 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 NPIPA5E9PKD4 350 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 SCDO00767 359 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 CHRM2P08172 466 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 ALOX5APP20292 161 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 FGF8P55075 233 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-201ENST00000318023 LDLRAD2Q5SZI1 272 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 TMEM225Q6GV28 225 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 UNQ5815/PRO19632Q6UWF5 114 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 SGPP2Q8IWX5 399 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 ZNF595Q8IYB9 648 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 TMEM256Q8N2U0 113 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 Q8NA96 180 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 OR4C5Q8NGB2 326 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 OR4D6Q8NGJ1 314 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 TECTBQ96PL2 329 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 ADOQ96SZ5 270 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 CNTD2Q9H8S5 307 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 COPS7AQ9UBW8 275 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 NPIPA1Q9UND3 350 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 GPR132Q9UNW8 380 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 HIF3AQ9Y2N7 669 aa8.13□□□□□ -1.11
CAPN3-201ENST00000318023 RBM7Q9Y580 266 aaKnown RBP8.13□□□□□ -1.11
CAPN3-201ENST00000318023 C17orf51A8MQB3 221 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 NUPR1O60356 82 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 NDUFB2O95178 105 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 GPR75O95800 540 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 PPBPP02775 128 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 GZMHP20718 246 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 RND2P52198 227 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 RPL23AP62750 156 aaKnown RBP8.12□□□□□ -1.11
CAPN3-201ENST00000318023 MLC1Q15049 377 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms