RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 HMGN3Q15651 99 aa11.77□□□□□ -0.53
RFFL-201ENST00000315249 R3HDM4Q96D70 268 aa11.77□□□□□ -0.53
RFFL-201ENST00000315249 PIPOXQ9P0Z9 390 aa11.77□□□□□ -0.53
RFFL-201ENST00000315249 RABAC1Q9UI14 185 aa11.77□□□□□ -0.53
RFFL-201ENST00000315249 IGHV3-21A0A0B4J1V1 117 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 DOLPP1Q86YN1 238 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 ZNF596Q8TC21 504 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 ZNRF4Q8WWF5 429 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 F5H697 171 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 ADAM10O14672 748 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 FBP1P09467 338 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 ACSF3Q4G176 576 aaPredicted RBP11.76□□□□□ -0.53
RFFL-201ENST00000315249 TEX29Q8N6K0 151 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 MITD1Q8WV92 249 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 SMIM4Q8WVI0 70 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 HGDQ93099 445 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 C10orf35Q96D05 121 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 CELA3AP09093 270 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 FAM27BQ5VT28 67 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 OR1K1Q8NGR3 316 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 LINC00052Q96N35 136 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 SLC25A5P05141 298 aaKnown RBP11.76□□□□□ -0.53
RFFL-201ENST00000315249 ARF6P62330 175 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 CCDC190Q86UF4 302 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 LFNGQ8NES3 379 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 C4orf51C9J302 202 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 TO15178 435 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 VDAC1P21796 283 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 PAFAH1B2P68402 229 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 GABRA6Q16445 453 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 ZSWIM8A7E2V4 1837 aa11.76□□□□□ -0.53
RFFL-201ENST00000315249 ZNF727A8MUV8 499 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 RFPL3SP0C7P2 107 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 PF4V1P10720 104 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 TBC1D26Q86UD7 250 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 C1orf174Q8IYL3 243 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 ZBTB44Q8NCP5 570 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 RNF122Q9H9V4 155 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 SLC17A5Q9NRA2 495 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 UQCC1Q9NVA1 299 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 ASAH1Q13510 395 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 OR5AP2Q8NGF4 316 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 SCGB1D1O95968 90 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 CRYBB2P43320 205 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 NGFRP08138 427 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 CLCF1Q9UBD9 225 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 NPAP1Q9NZP6 1156 aa11.75□□□□□ -0.53
RFFL-201ENST00000315249 NYNRINQ9P2P1 1898 aaKnown RBP11.74□□□□□ -0.53
RFFL-201ENST00000315249 CNN1P51911 297 aaKnown RBP11.74□□□□□ -0.53
RFFL-201ENST00000315249 SLC35B1P78383 322 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 BAK1Q16611 211 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 BTNL8Q6UX41 500 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 OR10A7Q8NGE5 316 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 ZPLD1Q8TCW7 415 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 MARC2Q969Z3 335 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 EAF1Q96JC9 268 aaPredicted RBP11.74□□□□□ -0.53
RFFL-201ENST00000315249 KCNK17Q96T54 332 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 GON7Q9BXV9 100 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 ASCL3Q9NQ33 180 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 TMED3Q9Y3Q3 217 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 WNK2Q9Y3S1 2297 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 IGLV3-19P01714 112 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 FAM106CPP0CH98 169 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 PGA4P0DJD7 388 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 PGA3P0DJD8 388 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 WDR89Q96FK6 387 aaPredicted RBP11.74□□□□□ -0.53
RFFL-201ENST00000315249 SIRT7Q9NRC8 400 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 CADP27708 2225 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 ZP4Q12836 540 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 CLEC12BQ2HXU8 276 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 H3F3CQ6NXT2 135 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 P2RX4Q99571 388 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 ZNF90Q03938 601 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 RXFP4Q8TDU9 374 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 ADAT3Q96EY9 351 aaPredicted RBP11.74□□□□□ -0.53
RFFL-201ENST00000315249 RASL12Q9NYN1 266 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 SLC38A11Q08AI6 406 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 NAA60Q9H7X0 242 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 ABCA4P78363 2273 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 SEC14L6B5MCN3 397 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 GUCA2BQ16661 112 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 VWA1Q6PCB0 445 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 RNF133Q8WVZ7 376 aa11.74□□□□□ -0.53
RFFL-201ENST00000315249 IGHA1P01876 353 aa11.73□□□□□ -0.53
RFFL-201ENST00000315249 CEBPDP49716 269 aaPredicted RBP11.73□□□□□ -0.53
RFFL-201ENST00000315249 DCAF12L2Q5VW00 463 aa11.73□□□□□ -0.53
RFFL-201ENST00000315249 MRPL22Q9NWU5 206 aaKnown RBP11.73□□□□□ -0.53
RFFL-201ENST00000315249 CD59P13987 128 aa11.73□□□□□ -0.53
RFFL-201ENST00000315249 LOXL3P58215 753 aa11.73□□□□□ -0.53
RFFL-201ENST00000315249 MMP7P09237 267 aaPredicted RBP11.73□□□□□ -0.53
RFFL-201ENST00000315249 HOXA4Q00056 320 aaPredicted RBP11.73□□□□□ -0.53
RFFL-201ENST00000315249 CTDSP1Q9GZU7 261 aa11.73□□□□□ -0.53
RFFL-201ENST00000315249 LOC105371242A0A075B767 164 aa11.73□□□□□ -0.53
RFFL-201ENST00000315249 K7N7A8 449 aa11.73□□□□□ -0.53
RFFL-201ENST00000315249 TMEM127O75204 238 aa11.73□□□□□ -0.53
RFFL-201ENST00000315249 PPP1CCP36873 323 aaKnown RBP11.73□□□□□ -0.53
RFFL-201ENST00000315249 TNFSF10P50591 281 aa11.73□□□□□ -0.53
RFFL-201ENST00000315249 TMEM231Q9H6L2 316 aa11.73□□□□□ -0.53
RFFL-201ENST00000315249 ELOVL5Q9NYP7 299 aa11.73□□□□□ -0.53
RFFL-201ENST00000315249 SYNGR3O43761 229 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms